Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TMX2-CTNND1H3BSU7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL731566.1-201ENST00000620490 1937 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SKP113-201ENST00000363891 295 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 SNORA56-201ENST00000383966 129 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 SNORA66-201ENST00000384792 133 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIR1271-201ENST00000408537 86 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 RNU2-50P-201ENST00000410494 143 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL590139.1-201ENST00000416267 400 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL807761.1-201ENST00000417622 171 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR2AM1P-201ENST00000422137 422 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR2AH1P-201ENST00000425717 928 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC124944.2-201ENST00000429866 1242 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR11I1P-201ENST00000486033 954 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AF230666.2-201ENST00000602328 725 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AP001521.2-201ENST00000608772 546 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AP005131.7-201ENST00000610087 611 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 A2MP1-204ENST00000566278 4130 ntBASIC4.95□□□□□ -1.62
TMX2-CTNND1H3BSU7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC112198.2-201ENST00000426589 6996 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SKP95-201ENST00000362860 303 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 RNU1-74P-201ENST00000384108 171 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 CYB5AP4-201ENST00000396692 399 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL021331.1-201ENST00000402817 582 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL359643.1-201ENST00000404109 423 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SKP114-201ENST00000410327 279 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC016397.1-201ENST00000412463 242 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC104333.2-201ENST00000422630 192 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR5M12P-201ENST00000423388 929 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 EI24P4-201ENST00000423683 1078 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC008072.1-201ENST00000434254 824 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL189P-201ENST00000468631 289 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 RN7SL738P-201ENST00000470264 297 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC137768.1-201ENST00000549998 553 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIR4270-201ENST00000581799 70 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIR4691-201ENST00000583764 85 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 MIR4737-201ENST00000583979 81 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL161616.1-201ENST00000611867 286 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AL122125.1-201ENST00000616999 600 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC105105.5-201ENST00000622635 1294 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC104623.2-202ENST00000623477 4002 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC022417.1-201ENST00000624768 1303 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC083843.3-201ENST00000623679 2186 ntBASIC4.94□□□□□ -1.62
TMX2-CTNND1H3BSU7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 MTHFD2P5-201ENST00000320415 844 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 AC013442.1-201ENST00000397347 228 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 RPL26P29-201ENST00000415623 438 ntBASIC4.93□□□□□ -1.62
TMX2-CTNND1H3BSU7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms