Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 RPL12P9-201ENST00000412942 488 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 RPSAP8-201ENST00000429844 889 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 PUDPP2-201ENST00000431423 643 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 CBWD4P-201ENST00000445695 655 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC010733.1-201ENST00000451515 401 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC016489.1-201ENST00000461109 375 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AL049714.1-201ENST00000466686 347 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 OR9A3P-202ENST00000485185 878 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC006120.1-201ENST00000579375 546 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AL356585.4-201ENST00000623078 1229 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AL157359.3-201ENST00000623771 217 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 MIR4496-201ENST00000635896 61 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AP005435.3-201ENST00000531260 3198 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC005839.1-201ENST00000624148 3213 ntBASIC9.31□□□□□ -0.92
RTN4Q9NQC3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC9.31□□□□□ -0.92
RTN4Q9NQC3 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 RNU6-845P-201ENST00000362578 103 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 Y_RNA.356-201ENST00000365475 113 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 LCN1P1-201ENST00000372031 505 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 RNU2-9P-201ENST00000410194 145 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 PIGX-204ENST00000421265 677 ntTSL 2 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 ACTG1P24-201ENST00000423783 877 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC010880.1-202ENST00000427950 432 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 ASS1P11-201ENST00000441309 1216 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC069213.3-201ENST00000454858 474 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 RPL23AP8-201ENST00000479812 475 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC138356.2-201ENST00000521192 667 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 BOLA3P1-201ENST00000530713 355 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC022880.2-201ENST00000532664 270 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC078886.1-201ENST00000549144 554 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 OR7E159P-201ENST00000553761 298 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AL352979.1-201ENST00000554238 297 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 C14orf166-206ENST00000556760 851 ntTSL 5 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AL138976.2-201ENST00000563989 694 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AL358335.3-201ENST00000604678 327 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 SMARCE1P7-201ENST00000605515 485 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AL355333.1-201ENST00000605632 279 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 RMST_3.1-201ENST00000611651 109 ntBASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 RANBP2-205ENST00000629728 156 ntTSL 5 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
RTN4Q9NQC3 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
RTN4Q9NQC3 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
RTN4Q9NQC3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RTN4Q9NQC3 ZNF402P-201ENST00000404435 3100 ntBASIC9.29□□□□□ -0.92
RTN4Q9NQC3 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.29□□□□□ -0.92
RTN4Q9NQC3 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
RTN4Q9NQC3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
RTN4Q9NQC3 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms