Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 EI24P3-201ENST00000399046 1062 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AL109941.1-201ENST00000401925 229 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 RPL10P10-201ENST00000403509 664 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 RPL26P29-201ENST00000415623 438 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 QRSL1P2-201ENST00000418582 964 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC093162.1-201ENST00000419682 124 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 PSMD10P3-201ENST00000437000 448 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC073073.1-201ENST00000493920 463 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 FTH1P11-201ENST00000517577 551 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC006116.3-201ENST00000592968 361 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC005084.1-201ENST00000605160 304 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 AC015914.2-201ENST00000618167 288 ntBASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
UPF3BQ9BZI7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC000374.1-201ENST00000434698 1745 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 ATP5HP3-201ENST00000396994 486 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC091390.1-201ENST00000433904 331 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 RHOT1P3-201ENST00000436571 331 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 PA2G4P6-201ENST00000438325 1197 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 RN7SL481P-201ENST00000477764 299 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 BX284632.1-201ENST00000478218 541 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 PRELID3BP5-201ENST00000508612 460 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 RPL23AP53-201ENST00000521854 457 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 MIR3934-201ENST00000579806 107 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 AC099654.11-201ENST00000638857 294 ntBASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
UPF3BQ9BZI7 SCARNA15-201ENST00000607520 4325 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC019072.1-201ENST00000604535 1551 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 SMG1P4-204ENST00000523028 4131 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 SCAND3P1-201ENST00000439854 1060 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC083982.1-201ENST00000485679 344 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 MIR378J-201ENST00000611988 109 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC099494.2-201ENST00000623371 978 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AL672167.1-205ENST00000641112 3080 ntBASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
UPF3BQ9BZI7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
UPF3BQ9BZI7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms