Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.23□□□□□ -1.41
CDK5RAP3Q96JB5 AL355834.1-201ENST00000556602 3965 ntBASIC6.23□□□□□ -1.41
CDK5RAP3Q96JB5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP3Q96JB5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP3Q96JB5 AC092070.2-203ENST00000598377 3644 ntBASIC6.23□□□□□ -1.41
CDK5RAP3Q96JB5 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP3Q96JB5 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC009962.1-201ENST00000567327 3813 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC079097.1-201ENST00000512187 1399 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AL606537.1-201ENST00000607258 2011 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 RN7SKP6-201ENST00000364795 319 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 SNORD56.6-201ENST00000384569 71 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ATF1P1-201ENST00000406040 927 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 TNPO1P1-201ENST00000423641 1138 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 RPL12P18-201ENST00000437175 325 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 MED6P1-201ENST00000439659 713 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC044797.1-201ENST00000445744 679 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AL358876.1-201ENST00000453364 1075 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC010374.1-201ENST00000503762 1237 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC138866.2-201ENST00000508650 584 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC034205.1-201ENST00000520621 638 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 TRIM51DP-201ENST00000529746 596 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 MIR4505-201ENST00000582238 73 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 CLIC4P2-201ENST00000601934 717 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC025175.1-201ENST00000606482 759 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 SMG1P7-201ENST00000565246 2704 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 AC007938.2-201ENST00000604666 2634 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 NXF4-202ENST00000416098 1465 ntBASIC6.22□□□□□ -1.41
CDK5RAP3Q96JB5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.21□□□□□ -1.41
CDK5RAP3Q96JB5 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDK5RAP3Q96JB5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.41
CDK5RAP3Q96JB5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDK5RAP3Q96JB5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CDK5RAP3Q96JB5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CDK5RAP3Q96JB5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 TMSB4XP4-201ENST00000323496 618 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 RNU4-2-201ENST00000365668 141 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 SNORA70.6-201ENST00000383934 134 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AP002784.2-201ENST00000397300 549 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 OR6E1P-201ENST00000414424 923 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC008173.1-201ENST00000418901 264 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 FABP5P3-201ENST00000437960 408 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AL359265.1-201ENST00000440296 795 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC073465.2-201ENST00000440938 498 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC023271.1-201ENST00000445936 1090 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 HMGN1P36-201ENST00000446623 298 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AL450023.1-201ENST00000450868 751 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 RPL7P61-201ENST00000451721 751 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 CALM1P2-201ENST00000452941 448 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 YWHAEP1-201ENST00000453697 763 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC020779.1-201ENST00000478757 796 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 EIF1P7-201ENST00000487533 337 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 IGHV3-63-201ENST00000518422 341 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC018552.1-201ENST00000562099 811 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 MTCO2P2-201ENST00000591258 225 ntBASIC6.21□□□□□ -1.42
CDK5RAP3Q96JB5 BNIP3P38-201ENST00000601117 544 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms