Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 E2F6P2-201ENST00000420708 748 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 OR5M12P-201ENST00000423388 929 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AC020890.1-201ENST00000491837 504 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 RPL23AP72-201ENST00000492447 435 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 SNORA26.10-201ENST00000516427 141 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 OR5AN2P-201ENST00000534535 896 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.44□□□□□ -1.22
VPS8Q8N3P4 CR383656.6-201ENST00000550518 394 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AC209154.1-201ENST00000582156 337 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 AC104785.1-201ENST00000603220 588 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 OR8G7P-201ENST00000616658 848 ntBASIC7.44□□□□□ -1.22
VPS8Q8N3P4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 AC135352.1-201ENST00000506173 1418 ntBASIC7.43□□□□□ -1.22
VPS8Q8N3P4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 YWHAZP2-201ENST00000440317 728 ntBASIC7.43□□□□□ -1.22
VPS8Q8N3P4 GYG1P1-201ENST00000460864 698 ntBASIC7.43□□□□□ -1.22
VPS8Q8N3P4 MTND4LP2-201ENST00000502312 285 ntBASIC7.43□□□□□ -1.22
VPS8Q8N3P4 AC073358.1-201ENST00000505671 684 ntBASIC7.43□□□□□ -1.22
VPS8Q8N3P4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.43□□□□□ -1.22
VPS8Q8N3P4 AC008745.1-201ENST00000604064 271 ntBASIC7.43□□□□□ -1.22
VPS8Q8N3P4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 DDX18P5-201ENST00000534547 1306 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AL592148.3-201ENST00000608771 2646 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AP000580.1-201ENST00000404439 358 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC245028.1-201ENST00000423259 256 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC010326.1-201ENST00000462726 602 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 OR52A4P-201ENST00000472867 958 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC023424.1-201ENST00000496058 459 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 OR51A1P-201ENST00000511110 946 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC073137.1-201ENST00000605636 634 ntBASIC7.42□□□□□ -1.22
VPS8Q8N3P4 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
VPS8Q8N3P4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 RN7SKP267-201ENST00000410381 285 ntBASIC7.41□□□□□ -1.22
VPS8Q8N3P4 FAR2P2-201ENST00000413041 594 ntBASIC7.41□□□□□ -1.22
VPS8Q8N3P4 FAR2P4-202ENST00000425399 584 ntBASIC7.41□□□□□ -1.22
VPS8Q8N3P4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 RN7SL738P-201ENST00000470264 297 ntBASIC7.41□□□□□ -1.22
VPS8Q8N3P4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 AC004232.3-201ENST00000622977 525 ntBASIC7.41□□□□□ -1.22
VPS8Q8N3P4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
VPS8Q8N3P4 KARSP3-201ENST00000571212 1504 ntBASIC7.41□□□□□ -1.22
VPS8Q8N3P4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 AC025574.1-201ENST00000554784 1653 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 SNORD113.2-201ENST00000364166 89 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 MIR659-201ENST00000384963 97 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 MIR298-201ENST00000401212 88 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 RN7SL459P-201ENST00000481078 302 ntBASIC7.4□□□□□ -1.22
VPS8Q8N3P4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC7.4□□□□□ -1.22
VPS8Q8N3P4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms