Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC011755.1-201ENST00000623763 2049 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 RNU6-1263P-201ENST00000384601 106 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 SETP15-201ENST00000412724 337 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 PRUNEP1-201ENST00000425846 705 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 BX323845.3-201ENST00000428215 527 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC007679.3-201ENST00000434035 414 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 ARF4P4-201ENST00000439608 520 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 MTCYBP12-201ENST00000440559 1134 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL358876.1-201ENST00000453364 1075 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 ACA64.1-201ENST00000459171 127 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 RPS3AP15-201ENST00000483874 781 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 CDH12P2-201ENST00000504393 298 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 SNORA19.3-201ENST00000516165 130 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 RNA5SP438-201ENST00000516561 112 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 SNORA31.13-201ENST00000516624 135 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC026407.1-201ENST00000518369 204 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 IGHV3-63-201ENST00000518422 341 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC034205.1-201ENST00000520621 638 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC013701.1-201ENST00000522657 465 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC008126.1-201ENST00000549019 480 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC010735.1-201ENST00000567305 1026 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 SNORD39.2-201ENST00000579995 76 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 CLIC4P2-201ENST00000601934 717 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL022067.1-201ENST00000602426 454 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC084373.1-201ENST00000603311 235 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC006946.3-201ENST00000609791 756 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL591926.1-201ENST00000620542 217 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 CASC19-281ENST00000642118 1554 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 HSPD1P11-201ENST00000508643 1702 ntBASIC4.94□□□□□ -1.62
SHFQ7M4L6 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHFQ7M4L6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SHFQ7M4L6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 NEPNP-201ENST00000404786 1371 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 RNA5SP273-201ENST00000362484 113 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 OR7E101P-201ENST00000400428 513 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 MIR1203-201ENST00000408812 85 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC005189.1-201ENST00000431286 310 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 MTND2P2-201ENST00000434633 945 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 OR52E3P-201ENST00000452083 936 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 RPS20P4-201ENST00000461659 355 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AP000797.2-201ENST00000475768 606 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC087672.1-201ENST00000479876 766 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 ENPP7P11-201ENST00000505915 627 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC114322.1-201ENST00000506771 926 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 Y_RNA.667-201ENST00000516212 107 ntBASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.93□□□□□ -1.62
SHFQ7M4L6 AC027026.1-201ENST00000532323 742 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms