Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC068714.1-201ENST00000559623 800 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC090751.1-201ENST00000566966 267 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 FRG1EP-201ENST00000634469 770 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 IFIT1P1-201ENST00000400497 1449 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC092079.1-201ENST00000558620 1985 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC005005.4-201ENST00000623789 16698 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RN7SKP74-201ENST00000362849 309 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RNU6-249P-201ENST00000363016 102 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 U3.7-201ENST00000363668 216 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RNU6-304P-201ENST00000364855 107 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC245096.1-201ENST00000413104 546 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 Z75741.2-201ENST00000417272 1167 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RPS7P8-201ENST00000418311 581 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC114814.2-201ENST00000419195 485 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RPS15AP30-201ENST00000420976 390 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 GAPDHP49-201ENST00000421421 961 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RPSAP65-201ENST00000429660 595 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC242426.1-201ENST00000435270 960 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 OTX2P1-201ENST00000450956 354 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC046144.1-201ENST00000478559 1853 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RPL23AP44-201ENST00000482216 473 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC010627.1-201ENST00000503819 1294 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RNU2-45P-201ENST00000516068 187 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 MTND4P33-201ENST00000556706 766 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC119403.2-201ENST00000590960 598 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC012368.3-201ENST00000604190 219 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 ATE1-AS1-202ENST00000636460 506 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 AC010325.3-201ENST00000641084 394 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 LINC02211-204ENST00000642024 1070 ntBASIC5.61□□□□□ -1.51
RNF220Q5VTB9 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF220Q5VTB9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF220Q5VTB9 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms