Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.83□□□□□ -1.48
COPB1P53618 CYCSP51-201ENST00000443545 318 ntBASIC5.83□□□□□ -1.48
COPB1P53618 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 RPS26P41-201ENST00000450370 284 ntBASIC5.83□□□□□ -1.48
COPB1P53618 AL139824.2-201ENST00000458731 1095 ntBASIC5.83□□□□□ -1.48
COPB1P53618 AC108161.1-201ENST00000461060 402 ntBASIC5.83□□□□□ -1.48
COPB1P53618 AC022133.1-201ENST00000490961 571 ntBASIC5.83□□□□□ -1.48
COPB1P53618 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COPB1P53618 AC138866.2-201ENST00000508650 584 ntBASIC5.83□□□□□ -1.48
COPB1P53618 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.83□□□□□ -1.48
COPB1P53618 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.83□□□□□ -1.48
COPB1P53618 NPM1P21-201ENST00000513394 762 ntBASIC5.83□□□□□ -1.48
COPB1P53618 SNORA70.11-201ENST00000515987 138 ntBASIC5.83□□□□□ -1.48
COPB1P53618 SNORA70.13-201ENST00000516116 138 ntBASIC5.83□□□□□ -1.48
COPB1P53618 OR7E13P-201ENST00000526052 910 ntBASIC5.83□□□□□ -1.48
COPB1P53618 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.83□□□□□ -1.48
COPB1P53618 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.83□□□□□ -1.48
COPB1P53618 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.83□□□□□ -1.48
COPB1P53618 FAM72A-208ENST00000607379 1139 ntBASIC5.83□□□□□ -1.48
COPB1P53618 MIR1264-201ENST00000616374 69 ntBASIC5.83□□□□□ -1.48
COPB1P53618 AC126175.1-201ENST00000617041 758 ntBASIC5.83□□□□□ -1.48
COPB1P53618 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 AC132068.1-201ENST00000623805 459 ntBASIC5.83□□□□□ -1.48
COPB1P53618 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
COPB1P53618 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COPB1P53618 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.83□□□□□ -1.48
COPB1P53618 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.83□□□□□ -1.48
COPB1P53618 AC091305.2-201ENST00000624049 1576 ntBASIC5.83□□□□□ -1.48
COPB1P53618 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPB1P53618 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 RARSP1-201ENST00000542842 1418 ntBASIC5.82□□□□□ -1.48
COPB1P53618 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 OR10AB1P-202ENST00000641219 1686 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.82□□□□□ -1.48
COPB1P53618 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COPB1P53618 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.82□□□□□ -1.48
COPB1P53618 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.82□□□□□ -1.48
COPB1P53618 CIR1P2-201ENST00000514821 1342 ntBASIC5.82□□□□□ -1.48
COPB1P53618 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COPB1P53618 RNA5SP46-201ENST00000362370 120 ntBASIC5.82□□□□□ -1.48
COPB1P53618 RN7SKP153-201ENST00000365026 316 ntBASIC5.82□□□□□ -1.48
COPB1P53618 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 MIR589-201ENST00000385238 99 ntBASIC5.82□□□□□ -1.48
COPB1P53618 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 OR6E1P-201ENST00000414424 923 ntBASIC5.82□□□□□ -1.48
COPB1P53618 BMS1P17-202ENST00000416720 316 ntBASIC5.82□□□□□ -1.48
COPB1P53618 RPL34P3-201ENST00000421454 338 ntBASIC5.82□□□□□ -1.48
COPB1P53618 MTND4LP13-201ENST00000425022 298 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC013262.1-201ENST00000426710 252 ntBASIC5.82□□□□□ -1.48
COPB1P53618 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 AC046176.1-201ENST00000435260 1170 ntBASIC5.82□□□□□ -1.48
COPB1P53618 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.82□□□□□ -1.48
COPB1P53618 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 AL096829.2-201ENST00000446582 742 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.82□□□□□ -1.48
COPB1P53618 RPL32P14-201ENST00000463196 378 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC104982.1-201ENST00000478775 574 ntBASIC5.82□□□□□ -1.48
COPB1P53618 MTCO1P31-201ENST00000506355 492 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.82□□□□□ -1.48
COPB1P53618 AC109481.1-201ENST00000509173 282 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.82□□□□□ -1.48
COPB1P53618 RPL7L1P4-201ENST00000513004 707 ntBASIC5.82□□□□□ -1.48
COPB1P53618 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.82□□□□□ -1.48
COPB1P53618 AC093014.1-201ENST00000548926 724 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AL049872.1-201ENST00000556323 322 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 AC005242.1-201ENST00000585658 438 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.82□□□□□ -1.48
COPB1P53618 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.82□□□□□ -1.48
COPB1P53618 MIR6826-201ENST00000617808 98 ntBASIC5.82□□□□□ -1.48
COPB1P53618 AP000484.1-201ENST00000620067 1252 ntBASIC5.82□□□□□ -1.48
COPB1P53618 CU639417.4-201ENST00000623928 207 ntBASIC5.82□□□□□ -1.48
COPB1P53618 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 AC017002.4-201ENST00000604721 1525 ntBASIC5.82□□□□□ -1.48
COPB1P53618 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 AC023421.1-201ENST00000590535 1785 ntBASIC5.82□□□□□ -1.48
COPB1P53618 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COPB1P53618 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.82□□□□□ -1.48
COPB1P53618 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COPB1P53618 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms