Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.91□□□□□ -1.46
NEK3P51956 AC245884.10-201ENST00000597355 337 ntBASIC5.91□□□□□ -1.46
NEK3P51956 EIF1P6-201ENST00000600054 334 ntBASIC5.91□□□□□ -1.46
NEK3P51956 AL513327.3-201ENST00000602618 469 ntBASIC5.91□□□□□ -1.46
NEK3P51956 AC093673.2-201ENST00000609674 331 ntBASIC5.91□□□□□ -1.46
NEK3P51956 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NEK3P51956 AL445670.1-201ENST00000618889 801 ntBASIC5.91□□□□□ -1.46
NEK3P51956 AP001005.3-201ENST00000622049 129 ntBASIC5.91□□□□□ -1.46
NEK3P51956 AC005618.4-201ENST00000625053 554 ntBASIC5.91□□□□□ -1.46
NEK3P51956 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.91□□□□□ -1.46
NEK3P51956 AC099654.8-201ENST00000637757 681 ntBASIC5.91□□□□□ -1.46
NEK3P51956 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NEK3P51956 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NEK3P51956 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NEK3P51956 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NEK3P51956 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.91□□□□□ -1.46
NEK3P51956 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
NEK3P51956 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NEK3P51956 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NEK3P51956 AL353796.1-201ENST00000561542 3241 ntBASIC5.91□□□□□ -1.46
NEK3P51956 OR13C1P-202ENST00000641378 2919 ntBASIC5.91□□□□□ -1.46
NEK3P51956 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NEK3P51956 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
NEK3P51956 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NEK3P51956 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
NEK3P51956 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
NEK3P51956 RNU6-236P-201ENST00000363886 106 ntBASIC5.9□□□□□ -1.46
NEK3P51956 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NEK3P51956 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.9□□□□□ -1.46
NEK3P51956 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.9□□□□□ -1.46
NEK3P51956 AC009302.1-201ENST00000417147 390 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.9□□□□□ -1.46
NEK3P51956 TCEA1P2-201ENST00000420496 906 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.9□□□□□ -1.46
NEK3P51956 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.9□□□□□ -1.46
NEK3P51956 DEFA9P-201ENST00000433042 285 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC138761.5-201ENST00000433967 325 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.9□□□□□ -1.46
NEK3P51956 MTND2P40-201ENST00000436718 841 ntBASIC5.9□□□□□ -1.46
NEK3P51956 MED28P3-201ENST00000444288 531 ntBASIC5.9□□□□□ -1.46
NEK3P51956 HMGN1P36-201ENST00000446623 298 ntBASIC5.9□□□□□ -1.46
NEK3P51956 TVP23BP2-201ENST00000455082 615 ntBASIC5.9□□□□□ -1.46
NEK3P51956 snoU109.3-201ENST00000459477 145 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC090602.1-201ENST00000469695 252 ntBASIC5.9□□□□□ -1.46
NEK3P51956 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.9□□□□□ -1.46
NEK3P51956 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NEK3P51956 RN7SL809P-201ENST00000482040 297 ntBASIC5.9□□□□□ -1.46
NEK3P51956 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.9□□□□□ -1.46
NEK3P51956 AC008565.1-201ENST00000509046 885 ntBASIC5.9□□□□□ -1.46
NEK3P51956 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC112191.2-201ENST00000522428 333 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
NEK3P51956 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NEK3P51956 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.9□□□□□ -1.46
NEK3P51956 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NEK3P51956 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
NEK3P51956 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.9□□□□□ -1.46
NEK3P51956 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.9□□□□□ -1.46
NEK3P51956 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.9□□□□□ -1.46
NEK3P51956 AC011445.2-201ENST00000599274 173 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC023762.1-201ENST00000603280 584 ntBASIC5.9□□□□□ -1.46
NEK3P51956 MIR6862-1-201ENST00000613016 70 ntBASIC5.9□□□□□ -1.46
NEK3P51956 MIR6862-2-201ENST00000614755 70 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC126175.1-201ENST00000617041 758 ntBASIC5.9□□□□□ -1.46
NEK3P51956 AC015726.3-201ENST00000624501 418 ntBASIC5.9□□□□□ -1.46
NEK3P51956 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.9□□□□□ -1.46
NEK3P51956 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.9□□□□□ -1.46
NEK3P51956 LINC01808-202ENST00000641680 1116 ntBASIC5.9□□□□□ -1.46
NEK3P51956 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
NEK3P51956 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NEK3P51956 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NEK3P51956 NSRP1P1-201ENST00000444067 1693 ntBASIC5.9□□□□□ -1.47
NEK3P51956 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
NEK3P51956 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.9□□□□□ -1.47
NEK3P51956 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.9□□□□□ -1.47
NEK3P51956 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NEK3P51956 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NEK3P51956 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NEK3P51956 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.9□□□□□ -1.47
NEK3P51956 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NEK3P51956 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.9□□□□□ -1.47
NEK3P51956 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.89□□□□□ -1.47
NEK3P51956 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 MFSD8-239ENST00000641590 2479 ntBASIC5.89□□□□□ -1.47
NEK3P51956 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.89□□□□□ -1.47
NEK3P51956 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.89□□□□□ -1.47
NEK3P51956 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 AC011933.2-201ENST00000578539 2790 ntBASIC5.89□□□□□ -1.47
NEK3P51956 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NEK3P51956 RN7SKP185-201ENST00000362813 326 ntBASIC5.89□□□□□ -1.47
NEK3P51956 RNU5B-1-201ENST00000363286 116 ntBASIC5.89□□□□□ -1.47
NEK3P51956 RNU5E-10P-201ENST00000363506 118 ntBASIC5.89□□□□□ -1.47
NEK3P51956 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms