Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC104971.1-201ENST00000495117 578 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 UGT2A3P7-201ENST00000510485 734 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 MIR8080-201ENST00000622224 89 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 AC106872.5-201ENST00000508856 1416 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DMAP28067 ASNSP1-201ENST00000518311 1939 ntBASIC4.34□□□□□ -1.71
HLA-DMAP28067 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
HLA-DMAP28067 MAPK10-303ENST00000641324 3959 ntBASIC4.34□□□□□ -1.72
HLA-DMAP28067 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DMAP28067 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.34□□□□□ -1.72
HLA-DMAP28067 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DMAP28067 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DMAP28067 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC068446.1-201ENST00000556425 1549 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 RNA5SP132-201ENST00000364725 118 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 SLC20A1P1-201ENST00000413906 956 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 GAPDHP34-201ENST00000432112 823 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC093414.1-201ENST00000434712 514 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 FMO7P-201ENST00000436045 768 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AL359839.1-201ENST00000451975 1160 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC104339.1-201ENST00000465478 348 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 RPL5P30-201ENST00000465511 891 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 RN7SL441P-201ENST00000492388 296 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AL117692.1-201ENST00000494283 713 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC097173.1-201ENST00000505862 819 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 NPM1P6-201ENST00000521088 871 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 CYCSP28-201ENST00000534284 321 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 PDCD5P1-201ENST00000543528 309 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AL049872.1-201ENST00000556323 322 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC005479.3-201ENST00000602790 431 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 AL669942.2-201ENST00000620352 697 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 MIR7154-201ENST00000620673 73 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DMAP28067 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
HLA-DMAP28067 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DMAP28067 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DMAP28067 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 HMGN1P20-201ENST00000411849 300 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DMAP28067 Z84478.1-201ENST00000438230 1219 ntBASIC4.32□□□□□ -1.72
HLA-DMAP28067 AC243772.1-201ENST00000451620 410 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms