Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CFTRP13569 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.16□□□□□ -1.1
CFTRP13569 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CFTRP13569 RN7SKP224-201ENST00000364140 325 ntBASIC8.16□□□□□ -1.1
CFTRP13569 OR1L6-202ENST00000373684 1044 ntBASIC8.16□□□□□ -1.1
CFTRP13569 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CFTRP13569 PPIAP31-201ENST00000405422 495 ntBASIC8.16□□□□□ -1.1
CFTRP13569 RNA5SP44-201ENST00000410446 133 ntBASIC8.16□□□□□ -1.1
CFTRP13569 RPS29P17-201ENST00000430795 166 ntBASIC8.16□□□□□ -1.1
CFTRP13569 FTH1P16-201ENST00000435241 552 ntBASIC8.16□□□□□ -1.1
CFTRP13569 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC8.16□□□□□ -1.1
CFTRP13569 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CFTRP13569 AC073073.1-201ENST00000493920 463 ntBASIC8.16□□□□□ -1.1
CFTRP13569 AP000827.1-201ENST00000527814 258 ntBASIC8.16□□□□□ -1.1
CFTRP13569 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.16□□□□□ -1.1
CFTRP13569 AC090948.2-201ENST00000607363 564 ntBASIC8.16□□□□□ -1.1
CFTRP13569 AL133243.1-201ENST00000614487 366 ntBASIC8.16□□□□□ -1.1
CFTRP13569 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.16□□□□□ -1.1
CFTRP13569 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CFTRP13569 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CFTRP13569 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
CFTRP13569 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CFTRP13569 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
CFTRP13569 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CFTRP13569 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CFTRP13569 RPL34P6-201ENST00000432390 345 ntBASIC8.15□□□□□ -1.1
CFTRP13569 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.15□□□□□ -1.1
CFTRP13569 Z95327.1-201ENST00000446082 482 ntBASIC8.15□□□□□ -1.1
CFTRP13569 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.15□□□□□ -1.1
CFTRP13569 SAP18P1-201ENST00000512058 390 ntBASIC8.15□□□□□ -1.1
CFTRP13569 OR4A6P-201ENST00000534364 970 ntBASIC8.15□□□□□ -1.1
CFTRP13569 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC8.15□□□□□ -1.1
CFTRP13569 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.15□□□□□ -1.1
CFTRP13569 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.15□□□□□ -1.1
CFTRP13569 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC8.15□□□□□ -1.1
CFTRP13569 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CFTRP13569 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CFTRP13569 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.15□□□□□ -1.11
CFTRP13569 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CFTRP13569 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
CFTRP13569 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CFTRP13569 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CFTRP13569 AL158827.1-201ENST00000416300 391 ntBASIC8.14□□□□□ -1.11
CFTRP13569 VN1R37P-201ENST00000419096 748 ntBASIC8.14□□□□□ -1.11
CFTRP13569 RN7SL810P-201ENST00000493031 276 ntBASIC8.14□□□□□ -1.11
CFTRP13569 ENPP7P11-201ENST00000505915 627 ntBASIC8.14□□□□□ -1.11
CFTRP13569 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.14□□□□□ -1.11
CFTRP13569 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CFTRP13569 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC8.14□□□□□ -1.11
CFTRP13569 AC093249.4-201ENST00000564755 259 ntBASIC8.14□□□□□ -1.11
CFTRP13569 MIR4444-1-201ENST00000581696 74 ntBASIC8.14□□□□□ -1.11
CFTRP13569 MIR4444-2-201ENST00000584390 74 ntBASIC8.14□□□□□ -1.11
CFTRP13569 SNX18P1Y-201ENST00000616231 511 ntBASIC8.14□□□□□ -1.11
CFTRP13569 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.14□□□□□ -1.11
CFTRP13569 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CFTRP13569 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC8.14□□□□□ -1.11
CFTRP13569 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CFTRP13569 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC8.14□□□□□ -1.11
CFTRP13569 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CFTRP13569 AC009643.2-201ENST00000603543 1448 ntBASIC8.14□□□□□ -1.11
CFTRP13569 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CFTRP13569 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.14□□□□□ -1.11
CFTRP13569 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CFTRP13569 SNORA70.6-201ENST00000383934 134 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.13□□□□□ -1.11
CFTRP13569 BX276092.6-201ENST00000430476 250 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AC138761.5-201ENST00000433967 325 ntBASIC8.13□□□□□ -1.11
CFTRP13569 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.13□□□□□ -1.11
CFTRP13569 PHBP16-201ENST00000446318 950 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC8.13□□□□□ -1.11
CFTRP13569 BX276092.8-201ENST00000455722 250 ntBASIC8.13□□□□□ -1.11
CFTRP13569 RN7SL197P-201ENST00000466981 299 ntBASIC8.13□□□□□ -1.11
CFTRP13569 RPL21P126-201ENST00000470049 478 ntBASIC8.13□□□□□ -1.11
CFTRP13569 Y_RNA.719-201ENST00000517156 106 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AP003730.1-201ENST00000524605 285 ntBASIC8.13□□□□□ -1.11
CFTRP13569 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.13□□□□□ -1.11
CFTRP13569 CARF-208ENST00000428585 2513 ntTSL 2 BASIC8.13□□□□□ -1.11
CFTRP13569 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.13□□□□□ -1.11
CFTRP13569 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 SNORA71.2-201ENST00000364941 134 ntBASIC8.13□□□□□ -1.11
CFTRP13569 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.13□□□□□ -1.11
CFTRP13569 RPS3AP54-201ENST00000435535 734 ntBASIC8.13□□□□□ -1.11
CFTRP13569 NUTF2P3-201ENST00000448540 384 ntBASIC8.13□□□□□ -1.11
CFTRP13569 RN7SL98P-201ENST00000462271 300 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AC041039.1-201ENST00000485656 536 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AP002812.1-201ENST00000495378 474 ntBASIC8.13□□□□□ -1.11
CFTRP13569 RNU6-709P-201ENST00000517257 104 ntBASIC8.13□□□□□ -1.11
CFTRP13569 IGLVIV-65-201ENST00000517313 360 ntBASIC8.13□□□□□ -1.11
CFTRP13569 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC8.13□□□□□ -1.11
CFTRP13569 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CFTRP13569 AC034229.2-201ENST00000566945 2508 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms