Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RN7SL197P-201ENST00000466981 299 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC006967.1-201ENST00000467608 589 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 RN7SL319P-201ENST00000480656 221 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC011005.3-201ENST00000491624 395 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 RNU6-415P-201ENST00000516252 97 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 MTND1P6-201ENST00000523621 946 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 AL158211.1-201ENST00000566763 763 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC6P09630 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 AP003117.1-201ENST00000602771 554 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC034229.4-201ENST00000607861 441 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AC010632.3-201ENST00000611377 369 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 AP003400.2-201ENST00000624036 666 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 AC005261.2-201ENST00000593427 4258 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC6P09630 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC6P09630 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC6P09630 MTND4P21-201ENST00000453886 1357 ntBASIC5.79□□□□□ -1.48
HOXC6P09630 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HOXC6P09630 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC6P09630 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC6P09630 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HOXC6P09630 SCARNA15-201ENST00000607520 4325 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 RNU6-891P-201ENST00000384280 111 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 MIR589-201ENST00000385238 99 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 ZFAND6P1-201ENST00000434138 605 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXC6P09630 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 RN7SL189P-201ENST00000468631 289 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC6P09630 RPL23AP72-201ENST00000492447 435 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 AC097173.1-201ENST00000505862 819 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC6P09630 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC6P09630 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC6P09630 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 AL512782.1-201ENST00000603093 364 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 AC098483.2-201ENST00000603158 454 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 AC019193.2-201ENST00000610012 634 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 AL512506.1-201ENST00000613918 449 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 AC083809.1-201ENST00000615051 472 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC6P09630 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC090220.1-201ENST00000593078 1699 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC6P09630 AC006210.2-201ENST00000367074 1545 ntBASIC5.78□□□□□ -1.48
HOXC6P09630 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC6P09630 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.77□□□□□ -1.48
HOXC6P09630 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXC6P09630 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC6P09630 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
HOXC6P09630 RNA5SP453-201ENST00000362503 119 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 AL354868.1-201ENST00000417077 482 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC6P09630 AC068287.1-201ENST00000430283 295 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 MED28P3-201ENST00000444288 531 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 REG1CP-206ENST00000447469 496 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 TPT1P12-201ENST00000448968 492 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 IGHV5-78-201ENST00000450948 295 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 MTND6P32-201ENST00000457611 483 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 RPL7P41-201ENST00000485823 957 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
HOXC6P09630 IGBP1P4-201ENST00000503202 879 ntBASIC5.77□□□□□ -1.49
HOXC6P09630 MORF4L2P1-201ENST00000503761 858 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms