Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR2AM1P-201ENST00000422137 422 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 Z74021.1-201ENST00000423610 407 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC092162.1-201ENST00000432828 434 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AC004938.1-201ENST00000438468 308 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 DNAJA1P5-201ENST00000440278 943 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 H2AFZP6-201ENST00000444403 394 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AC105399.1-202ENST00000447303 205 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 RN7SL515P-201ENST00000463999 297 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.97□□□□□ -1.61
SHOX2O60902 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC109481.1-201ENST00000509173 282 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC100770.1-201ENST00000532310 322 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AC078878.1-201ENST00000539832 958 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC209154.1-201ENST00000582156 337 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.97□□□□□ -1.61
SHOX2O60902 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC067773.1-201ENST00000603284 1094 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 AL021707.7-201ENST00000607991 416 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
SHOX2O60902 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.97□□□□□ -1.61
SHOX2O60902 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.97□□□□□ -1.61
SHOX2O60902 AC106872.5-201ENST00000508856 1416 ntBASIC4.97□□□□□ -1.61
SHOX2O60902 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.97□□□□□ -1.61
SHOX2O60902 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHOX2O60902 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHOX2O60902 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.96□□□□□ -1.61
SHOX2O60902 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
SHOX2O60902 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SHOX2O60902 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHOX2O60902 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHOX2O60902 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SHOX2O60902 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.96□□□□□ -1.62
SHOX2O60902 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 MIR448-201ENST00000362131 111 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 RNU6-249P-201ENST00000363016 102 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 SNORA58B-201ENST00000364259 136 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 MIR93-201ENST00000385024 80 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 MIR105-2-201ENST00000385083 81 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 MIR23A-201ENST00000385245 73 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 AL133388.1-201ENST00000404509 287 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 ATG4AP1-201ENST00000416893 538 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.96□□□□□ -1.62
SHOX2O60902 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 RPS29P9-201ENST00000440360 171 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.96□□□□□ -1.62
SHOX2O60902 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.96□□□□□ -1.62
SHOX2O60902 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.96□□□□□ -1.62
SHOX2O60902 SEPT14P1-201ENST00000458703 648 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AC011476.1-201ENST00000466725 307 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 RPL23AP65-201ENST00000475608 468 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.96□□□□□ -1.62
SHOX2O60902 MTATP6P1-201ENST00000514057 681 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.96□□□□□ -1.62
SHOX2O60902 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.96□□□□□ -1.62
SHOX2O60902 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.96□□□□□ -1.62
SHOX2O60902 AL121834.1-201ENST00000572284 509 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.96□□□□□ -1.62
SHOX2O60902 AC008521.2-201ENST00000591021 259 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 RPL7P50-201ENST00000600588 727 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AC130352.1-201ENST00000602979 661 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AC108865.2-201ENST00000606881 432 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 AC006453.5-201ENST00000636451 619 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.96□□□□□ -1.62
SHOX2O60902 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 HSPD1P14-201ENST00000432666 1618 ntBASIC4.96□□□□□ -1.62
SHOX2O60902 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.96□□□□□ -1.62
SHOX2O60902 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.96□□□□□ -1.62
SHOX2O60902 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.96□□□□□ -1.62
SHOX2O60902 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHOX2O60902 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.95□□□□□ -1.62
SHOX2O60902 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHOX2O60902 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHOX2O60902 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms