Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.32□□□□□ -1.56
LDB2O43679 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
LDB2O43679 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.32□□□□□ -1.56
LDB2O43679 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.31□□□□□ -1.56
LDB2O43679 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LDB2O43679 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 SNORA5.1-201ENST00000384275 131 ntBASIC5.31□□□□□ -1.56
LDB2O43679 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LDB2O43679 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
LDB2O43679 AC009804.1-201ENST00000400949 179 ntBASIC5.31□□□□□ -1.56
LDB2O43679 HSPA8P15-201ENST00000401676 786 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AP000534.2-201ENST00000412729 568 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AL024507.1-201ENST00000412741 274 ntBASIC5.31□□□□□ -1.56
LDB2O43679 BMS1P13-201ENST00000417301 885 ntBASIC5.31□□□□□ -1.56
LDB2O43679 HYALP1-201ENST00000417674 1279 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AL133325.1-201ENST00000421090 382 ntBASIC5.31□□□□□ -1.56
LDB2O43679 ARL2BPP3-201ENST00000421226 480 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AC114973.1-201ENST00000429057 632 ntBASIC5.31□□□□□ -1.56
LDB2O43679 PTP4A1P3-201ENST00000433661 420 ntBASIC5.31□□□□□ -1.56
LDB2O43679 CYCSP6-201ENST00000434498 302 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AC245517.2-201ENST00000442890 346 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AL163193.1-201ENST00000444895 788 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AL161722.1-201ENST00000446972 1032 ntBASIC5.31□□□□□ -1.56
LDB2O43679 CBX1P2-201ENST00000453841 458 ntBASIC5.31□□□□□ -1.56
LDB2O43679 DNAJB5P1-201ENST00000454004 806 ntBASIC5.31□□□□□ -1.56
LDB2O43679 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 RPL7P41-201ENST00000485823 957 ntBASIC5.31□□□□□ -1.56
LDB2O43679 RN7SL814P-201ENST00000487715 300 ntBASIC5.31□□□□□ -1.56
LDB2O43679 RN7SL205P-201ENST00000490174 284 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AC098976.1-201ENST00000513014 541 ntBASIC5.31□□□□□ -1.56
LDB2O43679 RNU6-941P-201ENST00000516346 108 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AP003355.1-201ENST00000518956 587 ntBASIC5.31□□□□□ -1.56
LDB2O43679 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.31□□□□□ -1.56
LDB2O43679 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.31□□□□□ -1.56
LDB2O43679 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.31□□□□□ -1.56
LDB2O43679 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.31□□□□□ -1.56
LDB2O43679 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.31□□□□□ -1.56
LDB2O43679 YWHAZP1-201ENST00000556286 722 ntBASIC5.31□□□□□ -1.56
LDB2O43679 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.31□□□□□ -1.56
LDB2O43679 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.31□□□□□ -1.56
LDB2O43679 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 AC012213.4-201ENST00000606457 354 ntBASIC5.31□□□□□ -1.56
LDB2O43679 MIR8084-201ENST00000614105 89 ntBASIC5.31□□□□□ -1.56
LDB2O43679 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.31□□□□□ -1.56
LDB2O43679 OR55B1P-203ENST00000641518 2602 ntBASIC5.31□□□□□ -1.56
LDB2O43679 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LDB2O43679 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LDB2O43679 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LDB2O43679 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LDB2O43679 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.3□□□□□ -1.56
LDB2O43679 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 AL645568.2-201ENST00000432815 1337 ntBASIC5.3□□□□□ -1.56
LDB2O43679 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LDB2O43679 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.3□□□□□ -1.56
LDB2O43679 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 MIR133A2-201ENST00000347538 102 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC005294.1-201ENST00000355509 281 ntBASIC5.3□□□□□ -1.56
LDB2O43679 RNA5SP183-201ENST00000362452 119 ntBASIC5.3□□□□□ -1.56
LDB2O43679 U3.7-201ENST00000363668 216 ntBASIC5.3□□□□□ -1.56
LDB2O43679 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LDB2O43679 RPL35AP24-201ENST00000413846 330 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC016769.2-201ENST00000414815 475 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.3□□□□□ -1.56
LDB2O43679 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LDB2O43679 BRWD1P3-201ENST00000428816 390 ntBASIC5.3□□□□□ -1.56
LDB2O43679 AC090018.1-201ENST00000434369 367 ntBASIC5.3□□□□□ -1.56
LDB2O43679 GAPDHP14-201ENST00000450472 937 ntBASIC5.3□□□□□ -1.56
LDB2O43679 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms