Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DPRXP4-201ENST00000578053 568 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC28A1O00337 MTCO2P22-201ENST00000603246 681 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AL356274.1-201ENST00000617064 410 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 CYP4F35P-202ENST00000636121 390 ntBASIC4.94□□□□□ -1.62
SLC28A1O00337 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC28A1O00337 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC28A1O00337 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC28A1O00337 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC28A1O00337 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC28A1O00337 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC097461.1-201ENST00000568928 2821 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SLC28A1O00337 MIR421-201ENST00000365696 85 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 SNORA2.3-201ENST00000383920 135 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 MT-TP-201ENST00000387461 68 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AL031985.1-201ENST00000392713 418 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC009804.1-201ENST00000400949 179 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 MIR1182-201ENST00000408363 97 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 MTCYBP29-201ENST00000436327 1006 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 Z99127.2-201ENST00000441426 334 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC093166.2-201ENST00000455969 1017 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 RN7SL443P-201ENST00000464331 290 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.93□□□□□ -1.62
SLC28A1O00337 ACTR6P1-201ENST00000514311 1104 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC28A1O00337 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.93□□□□□ -1.62
SLC28A1O00337 BNIP3P1-201ENST00000547295 580 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 AGGF1P9-201ENST00000561884 913 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AC069307.1-201ENST00000602820 447 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC037198.3-201ENST00000616754 526 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC126175.1-201ENST00000617041 758 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC009032.1-201ENST00000617574 431 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 AC005840.5-201ENST00000619166 599 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SLC28A1O00337 AL121950.1-201ENST00000624993 2077 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC28A1O00337 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 NXF4-202ENST00000416098 1465 ntBASIC4.93□□□□□ -1.62
SLC28A1O00337 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.93□□□□□ -1.62
SLC28A1O00337 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SLC28A1O00337 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SLC28A1O00337 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.92□□□□□ -1.62
SLC28A1O00337 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 AC011447.7-201ENST00000624228 1590 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
SLC28A1O00337 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 MIR600-201ENST00000385007 98 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.92□□□□□ -1.62
SLC28A1O00337 OR6C64P-201ENST00000419708 825 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AC006065.1-201ENST00000422539 802 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 RPL7AP61-201ENST00000443410 636 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AL133244.1-201ENST00000456007 258 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC28A1O00337 RPL5P22-201ENST00000480199 884 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 AC015864.1-201ENST00000496512 544 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 FABP5P6-201ENST00000510588 409 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.92□□□□□ -1.62
SLC28A1O00337 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms