Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNORA70-201ENST00000384436 135 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 RN7SKP125-201ENST00000410481 302 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC005033.1-201ENST00000428904 813 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 MRPL48P1-201ENST00000445390 636 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC090142.2-201ENST00000483263 416 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC068993.1-201ENST00000546724 589 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC093249.4-201ENST00000564755 259 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 MIR4310-201ENST00000582950 57 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC022467.1-201ENST00000614738 749 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AL353662.3-201ENST00000625131 237 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AC006453.5-201ENST00000636451 619 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 LINC01739-205ENST00000641890 573 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 AL133268.1-201ENST00000405676 1401 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 TCP1P3-201ENST00000414406 1498 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 SOCS5P3-201ENST00000425115 1576 ntBASIC4.36□□□□□ -1.71
TRAV27A0A087WT01 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC099654.2-201ENST00000433031 1980 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 RNU1-83P-201ENST00000363426 164 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 RN7SKP273-201ENST00000411392 314 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AL445213.1-201ENST00000412589 747 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 GTF2IP5-201ENST00000414608 731 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 RPS17P8-201ENST00000434525 335 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC093414.1-201ENST00000434712 514 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AL451139.1-201ENST00000434718 346 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 RPL12P18-201ENST00000437175 325 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 TDGF1P1-201ENST00000445734 527 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 RPL23AP56-201ENST00000460778 453 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC022832.1-201ENST00000530718 645 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 MIR3176-201ENST00000582210 90 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AP000919.1-201ENST00000582850 985 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC006116.3-201ENST00000592968 361 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC006363.1-201ENST00000603806 463 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 IMMP1LP1-201ENST00000605170 488 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 BNIP3P41-202ENST00000616656 861 ntBASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRAV27A0A087WT01 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 GNG5P5-201ENST00000420444 220 ntBASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 RNA5SP92-201ENST00000516437 110 ntBASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 FKBP1BP1-201ENST00000553366 325 ntBASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
TRAV27A0A087WT01 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms