Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 DDX39BP1-205ENST00000422507 192 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 AC097484.1-201ENST00000471148 389 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 RPS4XP1-201ENST00000482189 787 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 BX510359.5-201ENST00000515651 304 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 TVP23CP2-201ENST00000571473 623 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 AC005377.1-201ENST00000605126 456 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 IMMP1LP1-201ENST00000605170 488 ntBASIC5.26□□□□□ -1.57
CCDC42Q96M95 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC42Q96M95 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC42Q96M95 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
CCDC42Q96M95 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC42Q96M95 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 RNU1-83P-201ENST00000363426 164 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 MIR621-201ENST00000384919 96 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 SNORA17A-201ENST00000391185 133 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC104843.2-201ENST00000427666 297 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 AL589765.3-201ENST00000446084 462 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC092647.2-201ENST00000452998 253 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 RN7SL244P-201ENST00000493405 297 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 RNU6-964P-201ENST00000516524 69 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 SNORA74C-1-201ENST00000580726 201 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 SNORD91B-202ENST00000608459 222 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC015804.1-201ENST00000622935 435 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 SNORA17.5-201ENST00000630429 132 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC006453.5-201ENST00000636451 619 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.25□□□□□ -1.57
CCDC42Q96M95 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CCDC42Q96M95 AC008758.3-201ENST00000507003 1829 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 CASC19-281ENST00000642118 1554 ntBASIC5.25□□□□□ -1.57
CCDC42Q96M95 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC42Q96M95 SCN1A-220ENST00000641603 12506 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC42Q96M95 LINC01355-201ENST00000566551 5444 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC42Q96M95 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 MIR143-201ENST00000385300 106 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 OR2AO1P-201ENST00000476497 403 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 HMGN2P25-201ENST00000486956 268 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 COX6B1P5-201ENST00000509843 249 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 OR7E128P-201ENST00000532736 1024 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC42Q96M95 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 AP002505.2-201ENST00000623585 696 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC42Q96M95 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC42Q96M95 MAPK10-349ENST00000641767 3661 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 NXF4-202ENST00000416098 1465 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 XKRY2-202ENST00000623874 1581 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 XKRY-202ENST00000624960 1581 ntBASIC5.24□□□□□ -1.57
CCDC42Q96M95 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC42Q96M95 AL672167.1-203ENST00000641299 2975 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC42Q96M95 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC42Q96M95 RNA5SP242-201ENST00000364171 118 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 AL357515.1-201ENST00000402967 542 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 OR3A2-201ENST00000408891 1076 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC42Q96M95 RPS27P18-201ENST00000431701 247 ntBASIC5.23□□□□□ -1.57
CCDC42Q96M95 CFL1P1-202ENST00000432948 411 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms