Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 XKRYP4-201ENST00000414395 483 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC009518.2-201ENST00000418056 731 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 MTCYBP7-201ENST00000419540 1134 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.47□□□□□ -1.37
ERCC4Q92889 GTF2IP3-201ENST00000433887 494 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 MTND4P32-201ENST00000437189 1237 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC073052.1-201ENST00000440417 714 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 MTND1P29-201ENST00000448112 647 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 RSL24D1P3-201ENST00000449255 495 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 XKRYP5-201ENST00000449659 483 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 RPS12P31-201ENST00000491419 398 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 RPL37P23-201ENST00000492641 294 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC010486.2-201ENST00000505572 483 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 GLUD1P3-202ENST00000508551 200 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 HSD3BP3-201ENST00000514706 994 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 GAPDHP62-201ENST00000515313 990 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC139365.2-201ENST00000517972 253 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC084121.1-201ENST00000533882 835 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AP003717.3-201ENST00000544832 1180 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC005244.1-201ENST00000582566 339 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.47□□□□□ -1.37
ERCC4Q92889 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 AF287957.1-201ENST00000607368 1595 ntBASIC6.47□□□□□ -1.37
ERCC4Q92889 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.47□□□□□ -1.37
ERCC4Q92889 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
ERCC4Q92889 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.47□□□□□ -1.37
ERCC4Q92889 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.46□□□□□ -1.37
ERCC4Q92889 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ERCC4Q92889 AC018809.2-201ENST00000602436 3823 ntBASIC6.46□□□□□ -1.37
ERCC4Q92889 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.46□□□□□ -1.37
ERCC4Q92889 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
ERCC4Q92889 HSPD1P7-201ENST00000447985 1686 ntBASIC6.46□□□□□ -1.37
ERCC4Q92889 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.46□□□□□ -1.37
ERCC4Q92889 ADAM24P-201ENST00000398655 2101 ntBASIC6.46□□□□□ -1.37
ERCC4Q92889 AC007342.5-201ENST00000571340 2142 ntBASIC6.46□□□□□ -1.37
ERCC4Q92889 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 BRAFP1-201ENST00000445336 2703 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 TMSB4XP2-201ENST00000335179 210 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 RN7SKP185-201ENST00000362813 326 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 RNU6-236P-201ENST00000363886 106 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 RNU6-31P-201ENST00000384388 108 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL021331.1-201ENST00000402817 582 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 RPL10P10-201ENST00000403509 664 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC4Q92889 UBE2V1P11-201ENST00000411559 285 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL357752.1-201ENST00000412817 349 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 BX119904.4-201ENST00000424402 301 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC138761.5-201ENST00000433967 325 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 PNKDP1-201ENST00000435914 430 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC4Q92889 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 CST12P-201ENST00000457644 362 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 RNU1-88P-201ENST00000459274 128 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AC098847.1-201ENST00000473094 348 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC4Q92889 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.46□□□□□ -1.38
ERCC4Q92889 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
ERCC4Q92889 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC011853.1-201ENST00000518911 454 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL356057.1-201ENST00000533798 831 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AC137627.1-201ENST00000545761 289 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL049830.4-201ENST00000555149 351 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL121839.1-201ENST00000556233 1185 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AL845552.1-201ENST00000556820 323 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC092332.1-201ENST00000563684 829 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 MIR4502-201ENST00000580432 81 ntBASIC6.46□□□□□ -1.38
ERCC4Q92889 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC4Q92889 AC124856.1-201ENST00000600819 896 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms