Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 AL672167.2-201ENST00000377164 879 ntBASIC5.17□□□□□ -1.58
CDH4P55283 ATP5HP3-201ENST00000396994 486 ntBASIC5.17□□□□□ -1.58
CDH4P55283 VN1R31P-201ENST00000417498 730 ntBASIC5.17□□□□□ -1.58
CDH4P55283 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH4P55283 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH4P55283 NFYAP1-201ENST00000431953 972 ntBASIC5.17□□□□□ -1.58
CDH4P55283 VN1R54P-201ENST00000435210 1049 ntBASIC5.17□□□□□ -1.58
CDH4P55283 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH4P55283 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH4P55283 TCEA1P1-201ENST00000449716 880 ntBASIC5.17□□□□□ -1.58
CDH4P55283 RPL5P16-201ENST00000471467 790 ntBASIC5.17□□□□□ -1.58
CDH4P55283 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH4P55283 RPL5P22-201ENST00000480199 884 ntBASIC5.17□□□□□ -1.58
CDH4P55283 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
CDH4P55283 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 AC100784.1-201ENST00000522790 310 ntBASIC5.17□□□□□ -1.58
CDH4P55283 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH4P55283 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH4P55283 DPRXP4-201ENST00000578053 568 ntBASIC5.17□□□□□ -1.58
CDH4P55283 MEMO1P5-201ENST00000604810 406 ntBASIC5.17□□□□□ -1.58
CDH4P55283 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH4P55283 AC133644.2-201ENST00000608142 540 ntBASIC5.17□□□□□ -1.58
CDH4P55283 AC112694.2-201ENST00000623697 768 ntBASIC5.17□□□□□ -1.58
CDH4P55283 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CDH4P55283 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.17□□□□□ -1.58
CDH4P55283 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH4P55283 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH4P55283 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH4P55283 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH4P55283 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH4P55283 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH4P55283 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
CDH4P55283 INTS6P1-201ENST00000504674 2530 ntBASIC5.17□□□□□ -1.58
CDH4P55283 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDH4P55283 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH4P55283 AC003985.2-201ENST00000562268 1669 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC131971.1-201ENST00000332881 1482 ntBASIC5.16□□□□□ -1.58
CDH4P55283 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH4P55283 RNA5SP123-201ENST00000363244 119 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AL109941.1-201ENST00000401925 229 ntBASIC5.16□□□□□ -1.58
CDH4P55283 RPL21P67-201ENST00000402896 478 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AP002530.1-201ENST00000405705 684 ntBASIC5.16□□□□□ -1.58
CDH4P55283 U3.32-201ENST00000408116 212 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC098592.2-201ENST00000413158 265 ntBASIC5.16□□□□□ -1.58
CDH4P55283 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH4P55283 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH4P55283 AC006455.6-201ENST00000426192 893 ntBASIC5.16□□□□□ -1.58
CDH4P55283 HSPE1P16-201ENST00000426640 348 ntBASIC5.16□□□□□ -1.58
CDH4P55283 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH4P55283 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH4P55283 AL137845.2-201ENST00000444292 988 ntBASIC5.16□□□□□ -1.58
CDH4P55283 TRY2P-201ENST00000448860 689 ntBASIC5.16□□□□□ -1.58
CDH4P55283 RPS4XP12-201ENST00000461747 709 ntBASIC5.16□□□□□ -1.58
CDH4P55283 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH4P55283 RN7SL319P-201ENST00000480656 221 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC140172.1-201ENST00000502928 141 ntBASIC5.16□□□□□ -1.58
CDH4P55283 NDUFB5P1-201ENST00000508134 564 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC110775.1-201ENST00000513721 462 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC138832.1-201ENST00000522871 556 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC022616.2-201ENST00000523185 300 ntBASIC5.16□□□□□ -1.58
CDH4P55283 OR5AZ1P-201ENST00000527448 943 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC068993.1-201ENST00000546724 589 ntBASIC5.16□□□□□ -1.58
CDH4P55283 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH4P55283 AC011487.3-201ENST00000593607 453 ntBASIC5.16□□□□□ -1.58
CDH4P55283 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH4P55283 AC073575.2-201ENST00000614212 627 ntBASIC5.16□□□□□ -1.58
CDH4P55283 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH4P55283 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH4P55283 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH4P55283 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.16□□□□□ -1.58
CDH4P55283 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.16□□□□□ -1.58
CDH4P55283 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH4P55283 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH4P55283 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH4P55283 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH4P55283 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
CDH4P55283 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH4P55283 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
CDH4P55283 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH4P55283 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH4P55283 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH4P55283 RN7SKP104-201ENST00000362605 328 ntBASIC5.15□□□□□ -1.59
CDH4P55283 RN7SKP95-201ENST00000362860 303 ntBASIC5.15□□□□□ -1.59
CDH4P55283 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH4P55283 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CDH4P55283 AL136116.2-201ENST00000404020 785 ntBASIC5.15□□□□□ -1.59
CDH4P55283 RN7SKP125-201ENST00000410481 302 ntBASIC5.15□□□□□ -1.59
CDH4P55283 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH4P55283 TXNP5-201ENST00000441043 315 ntBASIC5.15□□□□□ -1.59
CDH4P55283 RN7SL826P-201ENST00000479724 288 ntBASIC5.15□□□□□ -1.59
CDH4P55283 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH4P55283 AL671862.1-201ENST00000515851 349 ntBASIC5.15□□□□□ -1.59
CDH4P55283 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms