Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 GUCY1B2-204ENST00000531898 1979 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFSF4P23510 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC012254.3-201ENST00000591183 2117 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC083843.2-201ENST00000568248 6253 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 AP005901.5-201ENST00000545779 1796 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 SMG1P6-201ENST00000532337 2930 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TNFSF4P23510 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 SNORA70H-201ENST00000383910 135 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 SNORA70J-201ENST00000384182 135 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 RNU6-1242P-201ENST00000391052 103 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL157702.1-201ENST00000398764 426 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 YWHAZP6-201ENST00000399764 738 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 ERHP2-201ENST00000402323 299 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 RNA5SP198-201ENST00000410376 127 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 RN7SKP161-201ENST00000411110 305 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 PCNPP4-201ENST00000414817 517 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 KRR1P1-201ENST00000419430 803 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 RNGTTP1-201ENST00000420965 728 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AC066692.1-201ENST00000421721 457 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 DPRXP1-201ENST00000426312 460 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 MOB1AP1-201ENST00000430903 535 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 PCBP2P1-201ENST00000437262 977 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 PPIAP17-201ENST00000438507 471 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AC004865.1-201ENST00000442276 1003 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.3□□□□□ -1.56
TNFSF4P23510 SNRPCP3-201ENST00000474888 476 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 VPS26AP1-201ENST00000483197 979 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AC021006.1-201ENST00000489849 553 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL158068.1-201ENST00000506116 616 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 CDC42P3-201ENST00000518493 633 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC004217.3-201ENST00000551552 878 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 MIR4502-201ENST00000580432 81 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 RN7SL475P-201ENST00000583379 298 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AC110743.1-201ENST00000584870 478 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.3□□□□□ -1.56
TNFSF4P23510 NF1P5-201ENST00000588287 448 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AL021368.3-201ENST00000607119 578 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AC007349.4-201ENST00000608114 532 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 AL080312.2-201ENST00000613001 630 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL158163.2-201ENST00000619110 700 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL591926.1-201ENST00000620542 217 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 AC073592.6-201ENST00000624271 415 ntBASIC5.3□□□□□ -1.56
TNFSF4P23510 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF4P23510 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TNFSF4P23510 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF4P23510 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF4P23510 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF4P23510 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TNFSF4P23510 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms