Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL158073.1-201ENST00000426848 1104 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC073900.1-201ENST00000429766 776 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 FTLP17-201ENST00000432567 525 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 MTCYBP45-201ENST00000435243 565 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 PGBD4P3-201ENST00000440731 581 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 RPL31P11-202ENST00000454082 372 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 MEMO1P3-201ENST00000459811 302 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RN7SL372P-201ENST00000461982 298 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC097493.1-201ENST00000463958 372 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC026254.2-201ENST00000475295 371 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 MYL6P4-201ENST00000477911 453 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC013828.1-201ENST00000481845 158 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RN7SL37P-201ENST00000490461 307 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RN7SL350P-201ENST00000492591 299 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 RN7SL649P-201ENST00000496974 275 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC025674.1-201ENST00000507074 324 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 ARL4AP2-201ENST00000507378 601 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC010493.1-201ENST00000513479 292 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC106800.2-201ENST00000514009 1103 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC138517.1-201ENST00000515724 568 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC008562.1-201ENST00000521763 330 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC013828.2-201ENST00000532487 235 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 SDHCP4-201ENST00000532834 510 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AK6P1-201ENST00000540219 478 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.72□□□□□ -1.33
PDGFAP04085 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 MIR3682-201ENST00000581338 84 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC060780.3-201ENST00000589464 80 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC104785.1-201ENST00000603220 588 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC020765.1-201ENST00000604296 328 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AL139286.1-201ENST00000604465 483 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.72□□□□□ -1.33
PDGFAP04085 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 AC007497.1-201ENST00000610421 561 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AL020991.1-201ENST00000612314 373 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 AL590396.3-201ENST00000636334 300 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
PDGFAP04085 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 LPAL2-203ENST00000454031 2498 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 WBP11P1-201ENST00000562560 1931 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC025125.1-201ENST00000624743 1922 ntBASIC6.72□□□□□ -1.33
PDGFAP04085 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.72□□□□□ -1.33
PDGFAP04085 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
PDGFAP04085 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.33
PDGFAP04085 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
PDGFAP04085 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.71□□□□□ -1.33
PDGFAP04085 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PDGFAP04085 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.71□□□□□ -1.33
PDGFAP04085 AC079097.1-201ENST00000512187 1399 ntBASIC6.71□□□□□ -1.33
PDGFAP04085 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDGFAP04085 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDGFAP04085 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.71□□□□□ -1.34
PDGFAP04085 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PDGFAP04085 Y_RNA.89-201ENST00000363031 102 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RNU6-1090P-201ENST00000364065 94 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RNU6-534P-201ENST00000364877 106 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 AC092634.1-201ENST00000366505 199 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
PDGFAP04085 AL390316.1-201ENST00000406279 553 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 AC017035.1-201ENST00000411999 1115 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RPL18AP14-201ENST00000417685 526 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RBMY2KP-201ENST00000418221 992 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RPL21P111-201ENST00000418453 477 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 AC234781.4-201ENST00000419384 244 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 AC109583.1-201ENST00000432156 268 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RPL7P11-201ENST00000437586 658 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.71□□□□□ -1.34
PDGFAP04085 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.71□□□□□ -1.34
PDGFAP04085 GAPDHP17-201ENST00000449858 1001 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 AL390026.1-201ENST00000456647 457 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.71□□□□□ -1.34
PDGFAP04085 RPL7P6-201ENST00000480903 738 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.71□□□□□ -1.34
PDGFAP04085 RPL19P11-201ENST00000495944 589 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 RN7SL775P-201ENST00000498361 336 ntBASIC6.71□□□□□ -1.34
PDGFAP04085 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms