Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.41□□□□□ -1.54
SMAD6O43541 AL671862.1-201ENST00000515851 349 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.41□□□□□ -1.54
SMAD6O43541 RN7SKP34-201ENST00000516142 244 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 MTND2P32-201ENST00000521584 1038 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.41□□□□□ -1.54
SMAD6O43541 DUX4L52-201ENST00000549363 777 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 MTND2P17-201ENST00000550281 688 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.41□□□□□ -1.54
SMAD6O43541 MIR4675-201ENST00000577898 77 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC007448.1-201ENST00000582714 234 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC006272.2-201ENST00000594725 163 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC025165.5-201ENST00000602802 578 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC002069.2-201ENST00000603580 883 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC108738.1-201ENST00000603703 237 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 AL158062.1-201ENST00000619632 745 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 SOCS5P3-201ENST00000425115 1576 ntBASIC5.41□□□□□ -1.54
SMAD6O43541 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SMAD6O43541 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SMAD6O43541 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SMAD6O43541 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMAD6O43541 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMAD6O43541 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SMAD6O43541 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMAD6O43541 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SMAD6O43541 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 AC106754.1-201ENST00000562632 1513 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 RPL23P2-201ENST00000320371 421 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SMAD6O43541 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMAD6O43541 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SMAD6O43541 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 AL672167.2-201ENST00000377164 879 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 MIR105-1-201ENST00000385222 81 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SMAD6O43541 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SMAD6O43541 AL607077.1-201ENST00000401718 499 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AL589655.1-201ENST00000405398 482 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 RNU4-34P-201ENST00000410431 124 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 OR2X1P-201ENST00000421144 687 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC007064.3-201ENST00000422608 359 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC005033.1-201ENST00000428904 813 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 AC138761.5-201ENST00000433967 325 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 AL359265.1-201ENST00000440296 795 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.4□□□□□ -1.54
SMAD6O43541 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.4□□□□□ -1.54
SMAD6O43541 AC107015.1-201ENST00000466902 747 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.4□□□□□ -1.54
SMAD6O43541 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.4□□□□□ -1.54
SMAD6O43541 AC112198.4-201ENST00000515450 351 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 OR10D4P-201ENST00000525892 951 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.4□□□□□ -1.54
SMAD6O43541 OR10G5P-201ENST00000532733 358 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.4□□□□□ -1.54
SMAD6O43541 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.4□□□□□ -1.54
SMAD6O43541 OR8K4P-201ENST00000534608 872 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.4□□□□□ -1.54
SMAD6O43541 MTCYBP27-201ENST00000555160 670 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC090888.2-201ENST00000559765 1144 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC018552.1-201ENST00000562099 811 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.4□□□□□ -1.54
SMAD6O43541 AC020915.5-201ENST00000596836 964 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AL445435.1-201ENST00000604232 665 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC009027.1-201ENST00000604510 479 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AP001033.2-201ENST00000609701 1003 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC009032.1-201ENST00000617574 431 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 uc_338.7-201ENST00000621834 124 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC018445.2-201ENST00000622987 260 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AP003400.3-201ENST00000624904 346 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 MTND2P41-201ENST00000637599 773 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 AC013437.2-201ENST00000639587 677 ntBASIC5.4□□□□□ -1.54
SMAD6O43541 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SMAD6O43541 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SMAD6O43541 MTCO1P22-201ENST00000604619 1360 ntBASIC5.4□□□□□ -1.55
SMAD6O43541 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SMAD6O43541 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.39□□□□□ -1.55
SMAD6O43541 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.39□□□□□ -1.55
SMAD6O43541 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.39□□□□□ -1.55
SMAD6O43541 ADAM24P-201ENST00000398655 2101 ntBASIC5.39□□□□□ -1.55
SMAD6O43541 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SMAD6O43541 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms