Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 TPT1P13-201ENST00000449760 499 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 RPS3AP53-201ENST00000454716 778 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC092691.2-201ENST00000461787 803 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 NPM1P17-201ENST00000479221 602 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 RNU6-1102P-201ENST00000516149 96 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC004923.2-201ENST00000529649 369 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC137768.1-201ENST00000549998 553 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 DNAJC19P3-201ENST00000594491 331 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AF230666.2-201ENST00000602328 725 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC087783.2-201ENST00000605070 562 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AL135786.2-201ENST00000608422 615 ntBASIC5.93□□□□□ -1.46
HERC6Q8IVU3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.93□□□□□ -1.46
HERC6Q8IVU3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 TCP1P3-201ENST00000414406 1498 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 SNORA51.8-201ENST00000384234 132 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MIR137-201ENST00000385223 102 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 GAPDHP15-201ENST00000398586 975 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 TAF9BP2-201ENST00000400856 499 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC211486.3-201ENST00000412694 621 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 TATDN1P1-201ENST00000414123 891 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC023512.1-201ENST00000444513 499 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 RPS29P33-201ENST00000456717 146 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 EIF2S2P5-201ENST00000457635 968 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 HMGB1P44-201ENST00000508597 572 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC108120.2-201ENST00000512973 294 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC079075.1-201ENST00000559543 878 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 NMNAT1P5-201ENST00000559657 841 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MTATP6P2-201ENST00000603319 678 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC005084.1-201ENST00000605160 304 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 NANOGP3-201ENST00000605855 286 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC097460.3-201ENST00000623099 442 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC090617.9-201ENST00000623751 147 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 MT-RNR2-201ENST00000387347 1559 ntBASIC5.92□□□□□ -1.46
HERC6Q8IVU3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HERC6Q8IVU3 AC004656.1-201ENST00000568479 4951 ntBASIC5.91□□□□□ -1.46
HERC6Q8IVU3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 RN7SKP104-201ENST00000362605 328 ntBASIC5.91□□□□□ -1.46
HERC6Q8IVU3 RN7SKP186-201ENST00000365371 303 ntBASIC5.91□□□□□ -1.46
HERC6Q8IVU3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 RN7SKP126-201ENST00000411143 300 ntBASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AL354868.1-201ENST00000417077 482 ntBASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 GSTM5P1-201ENST00000434751 660 ntBASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.91□□□□□ -1.46
HERC6Q8IVU3 RPL23AP23-201ENST00000452590 471 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms