Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC018552.3-201ENST00000567416 561 ntBASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 SNORD95-201ENST00000579879 68 ntBASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC012616.1-201ENST00000600294 197 ntBASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC132068.1-201ENST00000623805 459 ntBASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 MAPK10-304ENST00000641341 3984 ntBASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AL022322.2-201ENST00000624072 20397 ntBASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.11□□□□□ -1.59
NUP54Q7Z3B4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RNA5SP319-201ENST00000362768 119 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RNA5SP242-201ENST00000364171 118 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RNU6-40P-201ENST00000384254 107 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 Z93019.1-201ENST00000416450 973 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL513325.1-201ENST00000417716 1034 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC009506.2-201ENST00000420635 840 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC007161.1-204ENST00000423039 460 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL354766.1-201ENST00000423396 542 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL390879.2-203ENST00000426943 1121 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RPL5P2-201ENST00000429598 854 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 OR6D1P-201ENST00000436165 939 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 IGBP1P3-201ENST00000447449 1000 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL353718.1-201ENST00000451028 517 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RN7SL101P-201ENST00000496350 279 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RN7SKP99-201ENST00000517028 307 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC092474.3-201ENST00000603022 568 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 PSMA6P4-201ENST00000603247 718 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL359715.4-201ENST00000606629 1436 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AL022394.1-201ENST00000606979 292 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC004477.3-201ENST00000614061 590 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 MIR6133-201ENST00000617057 108 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC021766.1-201ENST00000624404 741 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 AC007938.2-201ENST00000604666 2634 ntBASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.1□□□□□ -1.59
NUP54Q7Z3B4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AL118496.1-201ENST00000440201 1812 ntBASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
NUP54Q7Z3B4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms