Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 RNA5SP123-201ENST00000363244 119 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AL645733.1-201ENST00000402250 217 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 BX323845.1-201ENST00000432417 179 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 MTND6P5-201ENST00000448266 512 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 RN7SL97P-201ENST00000486780 299 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 RPL37AP8-201ENST00000494116 276 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 OR1F2P-201ENST00000570470 933 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 MIR4646-201ENST00000580775 63 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 MIR4691-201ENST00000583764 85 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 AP002884.5-201ENST00000595053 1132 ntBASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
RFWD3Q6PCD5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC131971.1-201ENST00000332881 1482 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 SNORA48.4-201ENST00000391089 134 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AL109941.1-201ENST00000401925 229 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 DDX39BP1-205ENST00000422507 192 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 NDUFA5P8-201ENST00000449019 346 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 RN7SKP260-201ENST00000516907 149 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC084033.1-201ENST00000550830 633 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC105254.2-201ENST00000603636 436 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AC079791.1-201ENST00000605356 973 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 AF117829.2-201ENST00000619538 361 ntBASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.27□□□□□ -1.57
RFWD3Q6PCD5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 SMG1P7-201ENST00000565246 2704 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 RN7SKP104-201ENST00000362605 328 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AL353625.1-202ENST00000366273 571 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 EI24P3-201ENST00000399046 1062 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 CHMP1B2P-201ENST00000399581 597 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 RPL10P10-201ENST00000403509 664 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 RN7SKP125-201ENST00000410481 302 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC234781.4-201ENST00000419384 244 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC104333.2-201ENST00000422630 192 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 PA2G4P6-201ENST00000438325 1197 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 KNOP1P3-201ENST00000446933 426 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 RN7SL443P-201ENST00000464331 290 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC010350.1-201ENST00000504908 231 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 MIR4436B2-201ENST00000581415 91 ntBASIC5.26□□□□□ -1.57
RFWD3Q6PCD5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms