Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC092376.2-201ENST00000622621 4116 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
PDS5AQ29RF7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 COX5BP7-201ENST00000414780 274 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AL590139.1-201ENST00000416267 400 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 HMGB1P32-201ENST00000425971 565 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 BX119904.3-201ENST00000428194 957 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 TXNP5-201ENST00000441043 315 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC017099.1-201ENST00000448261 1028 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 SLC25A18P1-201ENST00000449385 454 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 OR52E3P-201ENST00000452083 936 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC007686.1-201ENST00000488511 463 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 SNRPGP1-201ENST00000553864 222 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC068790.7-201ENST00000602347 528 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC012467.1-201ENST00000607740 256 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 MIR6820-201ENST00000611508 62 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC091932.2-201ENST00000623014 291 ntBASIC6.02□□□□□ -1.45
PDS5AQ29RF7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDS5AQ29RF7 RNA5SP187-201ENST00000384400 119 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 Z80107.2-201ENST00000445127 392 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AURKAPS2-201ENST00000454983 333 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC147055.1-201ENST00000509261 750 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC116553.2-201ENST00000564203 463 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC091042.1-201ENST00000579213 173 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 PRPF19P1-201ENST00000584766 898 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC011453.2-201ENST00000603737 729 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AL133445.2-201ENST00000611191 527 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC026367.3-201ENST00000619032 590 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AC099654.2-201ENST00000433031 1980 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.01□□□□□ -1.45
PDS5AQ29RF7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDS5AQ29RF7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDS5AQ29RF7 RPL10P10-201ENST00000403509 664 ntBASIC6□□□□□ -1.45
PDS5AQ29RF7 SETP9-201ENST00000423837 832 ntBASIC6□□□□□ -1.45
PDS5AQ29RF7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6□□□□□ -1.45
PDS5AQ29RF7 AC063943.1-201ENST00000465434 453 ntBASIC6□□□□□ -1.45
PDS5AQ29RF7 OR52A4P-202ENST00000481634 799 ntBASIC6□□□□□ -1.45
PDS5AQ29RF7 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6□□□□□ -1.45
PDS5AQ29RF7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6□□□□□ -1.45
PDS5AQ29RF7 AP003168.1-201ENST00000530091 307 ntBASIC6□□□□□ -1.45
PDS5AQ29RF7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6□□□□□ -1.45
PDS5AQ29RF7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms