Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 GAPDHP14-201ENST00000450472 937 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 TVP23BP2-201ENST00000455082 615 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 RPS7P6-201ENST00000485777 579 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 RN7SL423P-201ENST00000486202 304 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.53□□□□□ -1.68
CX3CL1P78423 EIF4A2P5-201ENST00000529914 499 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CL1P78423 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC125612.1-201ENST00000547580 377 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC079600.1-201ENST00000550326 297 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AL049830.4-201ENST00000555149 351 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 YWHAZP1-201ENST00000556286 722 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AGGF1P7-201ENST00000562369 913 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC011492.1-201ENST00000600023 315 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC026979.4-201ENST00000606555 645 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC022960.3-201ENST00000619794 441 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC010608.3-201ENST00000625048 527 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC126544.2-201ENST00000625174 749 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC099654.6-201ENST00000636487 512 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 MIR1910-201ENST00000636955 80 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC132825.7-201ENST00000638744 335 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CX3CL1P78423 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CX3CL1P78423 MTCO1P18-201ENST00000455518 1419 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 AC106872.5-201ENST00000508856 1416 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.53□□□□□ -1.68
CX3CL1P78423 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.53□□□□□ -1.68
CX3CL1P78423 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.53□□□□□ -1.69
CX3CL1P78423 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CX3CL1P78423 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.53□□□□□ -1.69
CX3CL1P78423 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CX3CL1P78423 LYPLA1P3-201ENST00000402650 695 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 DEFB130D-201ENST00000426866 237 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 ETF1P3-201ENST00000430422 1160 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC011242.1-201ENST00000433596 1158 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AC092685.1-201ENST00000447960 1243 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AL445665.1-202ENST00000452436 324 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 RNU7-27P-201ENST00000459281 62 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AC092905.1-201ENST00000467527 949 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.52□□□□□ -1.69
CX3CL1P78423 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 MIR548Y-201ENST00000582739 110 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC015802.2-201ENST00000589690 189 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC063977.5-201ENST00000601044 974 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AC023762.1-201ENST00000603280 584 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 OR2BH1P-201ENST00000608850 864 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 RN7SL544P-201ENST00000617232 284 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AL512427.1-201ENST00000618593 349 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 RN7SL763P-201ENST00000620922 284 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms