Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIM2P55344 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.77□□□□□ -1.65
LIM2P55344 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
LIM2P55344 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
LIM2P55344 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LIM2P55344 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LIM2P55344 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.76□□□□□ -1.65
LIM2P55344 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 HSPA8P18-201ENST00000439846 1928 ntBASIC4.76□□□□□ -1.65
LIM2P55344 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LIM2P55344 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LIM2P55344 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.76□□□□□ -1.65
LIM2P55344 SPTLC1P2-201ENST00000407089 121 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC098592.2-201ENST00000413158 265 ntBASIC4.76□□□□□ -1.65
LIM2P55344 RPL23AP27-201ENST00000415161 451 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC093162.1-201ENST00000419682 124 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.76□□□□□ -1.65
LIM2P55344 HMGB1P32-201ENST00000425971 565 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 AC000374.1-201ENST00000434698 1745 ntBASIC4.76□□□□□ -1.65
LIM2P55344 RHOT1P3-201ENST00000436571 331 ntBASIC4.76□□□□□ -1.65
LIM2P55344 RAB9AP5-201ENST00000437794 597 ntBASIC4.76□□□□□ -1.65
LIM2P55344 RPS29P9-201ENST00000440360 171 ntBASIC4.76□□□□□ -1.65
LIM2P55344 TXNP5-201ENST00000441043 315 ntBASIC4.76□□□□□ -1.65
LIM2P55344 RAB9AP2-201ENST00000443911 597 ntBASIC4.76□□□□□ -1.65
LIM2P55344 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 BTF3P6-201ENST00000448054 499 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC073850.1-201ENST00000449243 255 ntBASIC4.76□□□□□ -1.65
LIM2P55344 TCEA1P1-201ENST00000449716 880 ntBASIC4.76□□□□□ -1.65
LIM2P55344 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.76□□□□□ -1.65
LIM2P55344 RN7SL214P-201ENST00000487317 265 ntBASIC4.76□□□□□ -1.65
LIM2P55344 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.76□□□□□ -1.65
LIM2P55344 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.76□□□□□ -1.65
LIM2P55344 AC013701.1-201ENST00000522657 465 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC012339.2-201ENST00000523996 453 ntBASIC4.76□□□□□ -1.65
LIM2P55344 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 HMGN2P6-201ENST00000551091 273 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC011840.5-201ENST00000582125 771 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.76□□□□□ -1.65
LIM2P55344 AC138473.1-201ENST00000605717 526 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC093799.2-201ENST00000610062 578 ntBASIC4.76□□□□□ -1.65
LIM2P55344 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.76□□□□□ -1.65
LIM2P55344 AC009120.7-201ENST00000623452 780 ntBASIC4.76□□□□□ -1.65
LIM2P55344 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.76□□□□□ -1.65
LIM2P55344 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.76□□□□□ -1.65
LIM2P55344 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
LIM2P55344 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 AC025574.1-201ENST00000554784 1653 ntBASIC4.76□□□□□ -1.65
LIM2P55344 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LIM2P55344 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.76□□□□□ -1.65
LIM2P55344 AC007342.9-201ENST00000623877 1385 ntBASIC4.76□□□□□ -1.65
LIM2P55344 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.75□□□□□ -1.65
LIM2P55344 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 AC005005.4-201ENST00000623789 16698 ntBASIC4.75□□□□□ -1.65
LIM2P55344 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
LIM2P55344 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.75□□□□□ -1.65
LIM2P55344 AC092111.2-201ENST00000611627 1414 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC017079.1-201ENST00000333650 415 ntBASIC4.75□□□□□ -1.65
LIM2P55344 RNA5SP305-201ENST00000362665 119 ntBASIC4.75□□□□□ -1.65
LIM2P55344 ATP5HP3-201ENST00000396994 486 ntBASIC4.75□□□□□ -1.65
LIM2P55344 RPL10P10-201ENST00000403509 664 ntBASIC4.75□□□□□ -1.65
LIM2P55344 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.75□□□□□ -1.65
LIM2P55344 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.75□□□□□ -1.65
LIM2P55344 RN7SKP278-201ENST00000410504 342 ntBASIC4.75□□□□□ -1.65
LIM2P55344 GJA6P-201ENST00000415117 1042 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 OR5M12P-201ENST00000423388 929 ntBASIC4.75□□□□□ -1.65
LIM2P55344 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.75□□□□□ -1.65
LIM2P55344 AC092647.3-201ENST00000443044 633 ntBASIC4.75□□□□□ -1.65
LIM2P55344 OR7E125P-201ENST00000443450 846 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.75□□□□□ -1.65
LIM2P55344 NPM1P19-201ENST00000450070 712 ntBASIC4.75□□□□□ -1.65
LIM2P55344 HMGB1P4-201ENST00000455362 567 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LIM2P55344 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.75□□□□□ -1.65
LIM2P55344 SUMO2P4-201ENST00000504193 276 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC147055.1-201ENST00000509261 750 ntBASIC4.75□□□□□ -1.65
LIM2P55344 AC147055.3-201ENST00000510547 851 ntBASIC4.75□□□□□ -1.65
LIM2P55344 RNA5SP43-201ENST00000516559 110 ntBASIC4.75□□□□□ -1.65
LIM2P55344 RN7SKP147-201ENST00000517154 244 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms