Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LIMK1P53667 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
LIMK1P53667 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 MIR133B-201ENST00000362210 119 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 RN7SKP224-201ENST00000364140 325 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.43□□□□□ -1.54
LIMK1P53667 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 SNORA51.8-201ENST00000384234 132 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 SNORA5.1-201ENST00000384275 131 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LIMK1P53667 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 AL512504.1-201ENST00000415494 778 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.43□□□□□ -1.54
LIMK1P53667 AL590623.1-201ENST00000427864 105 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 C4BPAP2-201ENST00000428434 478 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AC011753.3-201ENST00000443436 406 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AC243772.1-201ENST00000451620 410 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.43□□□□□ -1.54
LIMK1P53667 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.43□□□□□ -1.54
LIMK1P53667 AC090114.3-201ENST00000479267 829 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.43□□□□□ -1.54
LIMK1P53667 RN7SKP147-201ENST00000517154 244 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.43□□□□□ -1.54
LIMK1P53667 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.43□□□□□ -1.54
LIMK1P53667 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.43□□□□□ -1.54
LIMK1P53667 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LIMK1P53667 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 AL450326.2-201ENST00000421913 1962 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LIMK1P53667 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LIMK1P53667 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LIMK1P53667 AL731532.1-201ENST00000623972 4236 ntBASIC5.43□□□□□ -1.54
LIMK1P53667 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.43□□□□□ -1.54
LIMK1P53667 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LIMK1P53667 INTS6P1-201ENST00000504674 2530 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC022893.2-201ENST00000564832 3296 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LIMK1P53667 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LIMK1P53667 RN7SKP104-201ENST00000362605 328 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 RNU1-32P-201ENST00000363937 159 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LIMK1P53667 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.42□□□□□ -1.54
LIMK1P53667 AL356806.1-201ENST00000422524 916 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC017019.1-201ENST00000426129 261 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AL445528.1-201ENST00000426330 420 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 VTI1BP4-201ENST00000427516 527 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AL136231.1-201ENST00000429407 730 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC138761.5-201ENST00000433967 325 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 BTBD7P2-201ENST00000441962 620 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 TPRKBP1-201ENST00000456243 481 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 RPS23P2-201ENST00000463671 415 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC025181.1-201ENST00000477507 416 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 IMPA1P1-201ENST00000510718 842 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 RNU6-760P-201ENST00000516078 97 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 MIR2117-201ENST00000516780 80 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.42□□□□□ -1.54
LIMK1P53667 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.42□□□□□ -1.54
LIMK1P53667 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC107918.3-201ENST00000533272 382 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC074029.2-201ENST00000551045 634 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.42□□□□□ -1.54
LIMK1P53667 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 AC019131.2-201ENST00000609071 870 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.42□□□□□ -1.54
LIMK1P53667 AL356274.1-201ENST00000617064 410 ntBASIC5.42□□□□□ -1.54
LIMK1P53667 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
LIMK1P53667 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms