Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 AC073136.1-201ENST00000449426 2884 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 RNA5SP345-201ENST00000410646 108 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 RANP7-201ENST00000418085 644 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 AC013429.2-201ENST00000418798 781 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 RPA2P2-201ENST00000419698 796 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 SETP9-201ENST00000423837 832 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFSF9P41273 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.32□□□□□ -1.56
TNFSF9P41273 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 AC092324.1-201ENST00000468671 324 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.32□□□□□ -1.56
TNFSF9P41273 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 AC006349.1-201ENST00000555526 235 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 AL049839.1-201ENST00000556151 657 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 AC005084.1-201ENST00000605160 304 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 MIR6820-201ENST00000611508 62 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFSF9P41273 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 AC009120.7-201ENST00000623452 780 ntBASIC5.32□□□□□ -1.56
TNFSF9P41273 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF9P41273 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TNFSF9P41273 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFSF9P41273 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TNFSF9P41273 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TNFSF9P41273 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF9P41273 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TNFSF9P41273 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AL035419.1-201ENST00000397037 564 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AL050305.1-201ENST00000399993 1230 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 OR2B7P-201ENST00000429302 934 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 FABP7P2-201ENST00000429946 379 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AL049745.1-201ENST00000433953 286 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AC093166.2-201ENST00000455969 1017 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 AC090142.2-201ENST00000483263 416 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 RNA5SP228-201ENST00000516232 133 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF9P41273 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF9P41273 PCNPP1-201ENST00000552501 511 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AGGF1P9-201ENST00000561884 913 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 BGLT3-201ENST00000564523 994 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AC127024.5-201ENST00000580085 462 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AL022394.1-201ENST00000606979 292 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 AC008758.3-201ENST00000507003 1829 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF9P41273 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 AC009643.2-201ENST00000603543 1448 ntBASIC5.31□□□□□ -1.56
TNFSF9P41273 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF9P41273 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF9P41273 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.3□□□□□ -1.56
TNFSF9P41273 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 SAMMSON-210ENST00000641260 1308 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TNFSF9P41273 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 MRPL35P2-201ENST00000448009 511 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AC234781.3-201ENST00000452540 973 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AL356981.1-201ENST00000454879 684 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AURKAPS2-201ENST00000454983 333 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AL356390.1-201ENST00000455684 397 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 RNU6-1334P-201ENST00000516032 105 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 HIGD1AP5-201ENST00000529959 259 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AC005868.1-201ENST00000536421 331 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TNFSF9P41273 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.3□□□□□ -1.56
TNFSF9P41273 EDDM3DP-201ENST00000554692 434 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.3□□□□□ -1.56
TNFSF9P41273 AC104785.1-201ENST00000603220 588 ntBASIC5.3□□□□□ -1.56
TNFSF9P41273 AC010424.2-201ENST00000607594 443 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms