Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHC1P29353 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 OR6K3-202ENST00000368146 996 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC007068.1-201ENST00000396690 844 ntBASIC4.71□□□□□ -1.66
SHC1P29353 RN7SKP273-201ENST00000411392 314 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC104333.2-201ENST00000422630 192 ntBASIC4.71□□□□□ -1.66
SHC1P29353 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHC1P29353 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 CYCSP24-201ENST00000445119 316 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AL161722.1-201ENST00000446972 1032 ntBASIC4.71□□□□□ -1.66
SHC1P29353 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.71□□□□□ -1.66
SHC1P29353 AC009127.1-201ENST00000467090 155 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC005532.2-201ENST00000467154 373 ntBASIC4.71□□□□□ -1.66
SHC1P29353 RN7SL799P-201ENST00000475891 298 ntBASIC4.71□□□□□ -1.66
SHC1P29353 BX284632.1-201ENST00000478218 541 ntBASIC4.71□□□□□ -1.66
SHC1P29353 RN7SL727P-201ENST00000482164 296 ntBASIC4.71□□□□□ -1.66
SHC1P29353 RN7SL814P-201ENST00000487715 300 ntBASIC4.71□□□□□ -1.66
SHC1P29353 RPS4XP14-201ENST00000493072 781 ntBASIC4.71□□□□□ -1.66
SHC1P29353 RPS24P16-201ENST00000497294 392 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 KCTD9P6-201ENST00000522306 950 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 OR4A46P-201ENST00000527255 933 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC134349.2-201ENST00000535136 910 ntBASIC4.71□□□□□ -1.66
SHC1P29353 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.71□□□□□ -1.66
SHC1P29353 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 AC004825.1-201ENST00000555068 586 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.71□□□□□ -1.66
SHC1P29353 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.71□□□□□ -1.66
SHC1P29353 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 AC009597.2-201ENST00000604659 592 ntBASIC4.71□□□□□ -1.66
SHC1P29353 GMCL1P2-201ENST00000605230 823 ntBASIC4.71□□□□□ -1.66
SHC1P29353 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.71□□□□□ -1.66
SHC1P29353 AC073869.10-201ENST00000642016 354 ntBASIC4.71□□□□□ -1.66
SHC1P29353 CR788268.1-201ENST00000603931 1809 ntBASIC4.71□□□□□ -1.66
SHC1P29353 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.71□□□□□ -1.66
SHC1P29353 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.66
SHC1P29353 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.71□□□□□ -1.66
SHC1P29353 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHC1P29353 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SHC1P29353 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SHC1P29353 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.7□□□□□ -1.66
SHC1P29353 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 AL672167.1-204ENST00000641875 3017 ntBASIC4.7□□□□□ -1.66
SHC1P29353 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.7□□□□□ -1.66
SHC1P29353 MUC2-202ENST00000613187 4845 ntBASIC4.7□□□□□ -1.66
SHC1P29353 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.7□□□□□ -1.66
SHC1P29353 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 AP000568.1-201ENST00000282964 442 ntBASIC4.7□□□□□ -1.66
SHC1P29353 RPL23P2-201ENST00000320371 421 ntBASIC4.7□□□□□ -1.66
SHC1P29353 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SHC1P29353 RNA5SP90-201ENST00000364801 99 ntBASIC4.7□□□□□ -1.66
SHC1P29353 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 MIR223-201ENST00000385204 110 ntBASIC4.7□□□□□ -1.66
SHC1P29353 RNU2-72P-201ENST00000411175 163 ntBASIC4.7□□□□□ -1.66
SHC1P29353 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 DPPA2P3-201ENST00000411853 655 ntBASIC4.7□□□□□ -1.66
SHC1P29353 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.7□□□□□ -1.66
SHC1P29353 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.7□□□□□ -1.66
SHC1P29353 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.7□□□□□ -1.66
SHC1P29353 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.7□□□□□ -1.66
SHC1P29353 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 RAD1P2-201ENST00000446414 663 ntBASIC4.7□□□□□ -1.66
SHC1P29353 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.7□□□□□ -1.66
SHC1P29353 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 RPS18P6-201ENST00000476880 458 ntBASIC4.7□□□□□ -1.66
SHC1P29353 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.7□□□□□ -1.66
SHC1P29353 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.7□□□□□ -1.66
SHC1P29353 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 RN7SL708P-201ENST00000580952 299 ntBASIC4.7□□□□□ -1.66
SHC1P29353 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.7□□□□□ -1.66
SHC1P29353 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.7□□□□□ -1.66
SHC1P29353 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.7□□□□□ -1.66
SHC1P29353 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.7□□□□□ -1.66
SHC1P29353 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
SHC1P29353 AC023421.1-201ENST00000590535 1785 ntBASIC4.7□□□□□ -1.66
SHC1P29353 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHC1P29353 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SHC1P29353 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms