Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC087672.1-201ENST00000479876 766 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AC044810.1-201ENST00000480271 711 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AC092349.1-201ENST00000504903 310 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC074087.1-201ENST00000512059 724 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 RNA5SP230-201ENST00000517039 122 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC104417.1-201ENST00000523974 751 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA3P29320 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHA3P29320 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA3P29320 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC092332.1-201ENST00000563684 829 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AL132657.2-201ENST00000564417 358 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 MT1CP-201ENST00000567054 174 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 RBM22P1-201ENST00000578589 1214 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AC005244.1-201ENST00000582566 339 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA3P29320 CCDC58P3-201ENST00000590792 430 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA3P29320 DUXAP3-201ENST00000603616 594 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.48□□□□□ -1.53
EPHA3P29320 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.48□□□□□ -1.53
EPHA3P29320 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.48□□□□□ -1.53
EPHA3P29320 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
EPHA3P29320 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
EPHA3P29320 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
EPHA3P29320 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA3P29320 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA3P29320 AC144833.1-201ENST00000567953 4089 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA3P29320 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA3P29320 MTND4P8-201ENST00000514997 1362 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
EPHA3P29320 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 RNU4-68P-201ENST00000364314 141 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 RNU4-40P-201ENST00000364351 143 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 RNU4-28P-201ENST00000364739 141 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 SNORD116-12-201ENST00000384468 92 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 MIR130B-202ENST00000385018 82 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 SNORD65C-201ENST00000390962 71 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 RNU6-1242P-201ENST00000391052 103 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AL021331.1-201ENST00000402817 582 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC010099.3-201ENST00000423896 409 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA3P29320 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC004022.1-201ENST00000447766 1066 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA3P29320 OR51B8P-201ENST00000449892 769 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA3P29320 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
EPHA3P29320 RPL7P45-201ENST00000455851 743 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA3P29320 NXT1P1-201ENST00000458481 316 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 RN7SL254P-201ENST00000460609 284 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC005165.2-201ENST00000466070 380 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 ATP5LP5-201ENST00000483050 299 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA3P29320 RPS27P20-201ENST00000492051 246 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC074255.1-201ENST00000511259 501 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.47□□□□□ -1.53
EPHA3P29320 RNA5SP303-201ENST00000516192 130 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.47□□□□□ -1.53
EPHA3P29320 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.47□□□□□ -1.53
EPHA3P29320 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC145350.1-201ENST00000567426 208 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC138207.8-204ENST00000579588 527 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 MIR4776-2-201ENST00000580204 80 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 PCNAP1-202ENST00000595299 752 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.47□□□□□ -1.53
EPHA3P29320 AC114878.2-201ENST00000604863 1251 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 AC011374.2-201ENST00000607135 526 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.47□□□□□ -1.53
EPHA3P29320 AL121890.3-201ENST00000618494 516 ntBASIC5.47□□□□□ -1.53
EPHA3P29320 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.47□□□□□ -1.53
EPHA3P29320 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms