Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL6A2P12110 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 OR56B2P-201ENST00000317102 954 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 RNU4-75P-201ENST00000364621 146 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 Y_RNA.559-201ENST00000384686 107 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC093719.1-202ENST00000392735 373 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.13□□□□□ -1.43
COL6A2P12110 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 P2RY10P2-201ENST00000416730 913 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.13□□□□□ -1.43
COL6A2P12110 IGLV3-4-201ENST00000432300 244 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 WDR82P2-201ENST00000444540 928 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
COL6A2P12110 RPL21P134-201ENST00000453468 483 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC073358.1-201ENST00000505671 684 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC021146.8-201ENST00000507455 733 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC005178.1-201ENST00000508392 440 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC138866.2-201ENST00000508650 584 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC008885.2-201ENST00000509506 930 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 GUSBP9-201ENST00000510138 584 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL6A2P12110 RNA5SP418-201ENST00000515951 117 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC116553.2-201ENST00000564203 463 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AGGF1P4-201ENST00000568249 801 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC079171.1-201ENST00000568788 914 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC026898.1-201ENST00000586404 571 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.13□□□□□ -1.43
COL6A2P12110 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 VN1R82P-201ENST00000601481 356 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC087752.4-201ENST00000605911 462 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 RNU6-84P-201ENST00000607737 102 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 MIR6849-201ENST00000618543 69 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC048341.3-201ENST00000619323 491 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 FANCD2P2-201ENST00000437591 1400 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.13□□□□□ -1.43
COL6A2P12110 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL6A2P12110 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 AP005901.5-201ENST00000545779 1796 ntBASIC6.13□□□□□ -1.43
COL6A2P12110 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
COL6A2P12110 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.13□□□□□ -1.43
COL6A2P12110 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL6A2P12110 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 AL391994.1-201ENST00000254724 282 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 AC092634.1-201ENST00000366505 199 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 VIM2P-201ENST00000402383 1294 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 RN7SKP205-201ENST00000410999 307 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 RN7SKP273-201ENST00000411392 314 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AF274854.1-201ENST00000413236 615 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 PAICSP7-201ENST00000419829 962 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AL139421.1-201ENST00000423010 169 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 RPL21P43-201ENST00000425440 472 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 RPL12P16-201ENST00000431098 498 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 AC083855.1-201ENST00000440041 258 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 GAPDHP23-201ENST00000444823 993 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms