Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.81□□□□□ -1.8
CXCL1P09341 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 AC009643.2-201ENST00000603543 1448 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CXCL1P09341 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CXCL1P09341 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 RHOT1P2-201ENST00000366423 333 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 SNORA16A-201ENST00000384342 137 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC3.81□□□□□ -1.8
CXCL1P09341 HMGN1P20-201ENST00000411849 300 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 AL354893.1-201ENST00000433735 348 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AC019185.1-201ENST00000442718 389 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.81□□□□□ -1.8
CXCL1P09341 ATP5G1P3-201ENST00000463301 410 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.81□□□□□ -1.8
CXCL1P09341 RPL7AP10-201ENST00000481016 791 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.81□□□□□ -1.8
CXCL1P09341 AC114781.3-201ENST00000512083 142 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 RPS27AP18-201ENST00000515536 459 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 RNA5SP271-201ENST00000516700 88 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 RN7SKP99-201ENST00000517028 307 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AF186190.1-201ENST00000517470 480 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC3.81□□□□□ -1.8
CXCL1P09341 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 RAB30-209ENST00000532548 644 ntTSL 3 BASIC3.81□□□□□ -1.8
CXCL1P09341 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.81□□□□□ -1.8
CXCL1P09341 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.81□□□□□ -1.8
CXCL1P09341 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 AC068305.2-201ENST00000550567 1205 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AL049872.1-201ENST00000556323 322 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.81□□□□□ -1.8
CXCL1P09341 IMMP1LP3-201ENST00000604197 224 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.81□□□□□ -1.8
CXCL1P09341 AL591926.1-201ENST00000620542 217 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CXCL1P09341 AC093775.1-201ENST00000624154 1868 ntBASIC3.81□□□□□ -1.8
CXCL1P09341 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.81□□□□□ -1.8
CXCL1P09341 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL1P09341 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.8□□□□□ -1.8
CXCL1P09341 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CXCL1P09341 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 RNA5SP46-201ENST00000362370 120 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 RNA5SP513-201ENST00000364648 118 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 GCNT6-201ENST00000379591 934 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 AC004386.1-201ENST00000393214 761 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 RNA5SP104-201ENST00000410989 118 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 RNA5SP39-201ENST00000411245 120 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL1P09341 AL596448.1-201ENST00000415024 392 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL1P09341 AC093155.2-201ENST00000420734 937 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 AC073052.1-201ENST00000440417 714 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AL353748.1-201ENST00000440753 474 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 CCDC75P1-201ENST00000469247 791 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL1P09341 VWA8P1-201ENST00000510889 176 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AC100770.1-201ENST00000532310 322 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CXCL1P09341 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL1P09341 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
CXCL1P09341 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.8□□□□□ -1.8
CXCL1P09341 WBP1LP8-201ENST00000617401 327 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AF117829.2-201ENST00000619538 361 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 RMST_9.1-201ENST00000619945 193 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AP001005.3-201ENST00000622049 129 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 MIR6806-201ENST00000622141 64 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 FO681491.1-202ENST00000623392 737 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AC132068.1-201ENST00000623805 459 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 AC074101.1-201ENST00000637861 241 ntBASIC3.8□□□□□ -1.8
CXCL1P09341 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.8□□□□□ -1.8
CXCL1P09341 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.8□□□□□ -1.8
CXCL1P09341 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms