Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC015799.1-201ENST00000622996 3122 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DOAP06340 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DOAP06340 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DOAP06340 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AL589647.1-201ENST00000402485 466 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 RPL23AP18-201ENST00000416139 468 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC096644.3-201ENST00000416788 338 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC093162.1-201ENST00000419682 124 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC092648.1-201ENST00000425870 423 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 RNF19BPX-201ENST00000426224 625 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AL512661.1-201ENST00000434586 1253 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 MOB1AP2-201ENST00000446060 614 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 OTX2P1-201ENST00000450956 354 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 RN7SL97P-201ENST00000486780 299 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 GLUD1P3-202ENST00000508551 200 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 RNU6-491P-201ENST00000516099 110 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 SUMO2P19-201ENST00000518920 295 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 OSBPL9P3-201ENST00000534523 595 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 OR8K4P-201ENST00000534608 872 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC092490.3-201ENST00000545370 572 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 OR11H3P-201ENST00000554547 982 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 MIR4646-201ENST00000580775 63 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC013444.2-201ENST00000603317 787 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC009027.1-201ENST00000604510 479 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC007275.1-201ENST00000621243 671 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC099494.2-201ENST00000623371 978 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AP003476.1-201ENST00000623984 516 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 AC135068.5-201ENST00000624197 983 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HLA-DOAP06340 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-DOAP06340 MTND5P31-201ENST00000419366 1374 ntBASIC6.31□□□□□ -1.4
HLA-DOAP06340 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AP002512.4-202ENST00000641599 4530 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC131971.1-201ENST00000332881 1482 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC087565.3-202ENST00000642085 1603 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 U3.28-201ENST00000391249 210 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 NPM1P36-201ENST00000415681 835 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 ELOCP11-201ENST00000436690 332 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 ELOCP16-201ENST00000444494 332 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AP002345.1-201ENST00000456493 928 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 METTL15P1-201ENST00000481421 1045 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC058823.1-201ENST00000485315 474 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC020699.1-201ENST00000505161 445 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 SNORA76.2-201ENST00000517095 137 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 SEC11B-201ENST00000518383 499 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AP006245.2-201ENST00000522004 300 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 KCTD9P6-201ENST00000522306 950 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 OR4A17P-201ENST00000526032 904 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AP000676.2-201ENST00000529711 301 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 OR8G3P-201ENST00000533406 921 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 UBTFL9-201ENST00000534504 1148 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 GLRXP2-201ENST00000555594 321 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AL359715.3-201ENST00000569267 2123 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms