Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 IPMKP1-201ENST00000425988 855 ntBASIC5□□□□□ -1.61
PDLIM1O00151 RPS26P4-201ENST00000431743 355 ntBASIC5□□□□□ -1.61
PDLIM1O00151 Z84478.1-201ENST00000438230 1219 ntBASIC5□□□□□ -1.61
PDLIM1O00151 RPL36AP39-201ENST00000445859 318 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 AC005008.1-201ENST00000456151 612 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC010469.1-201ENST00000463864 576 ntBASIC5□□□□□ -1.61
PDLIM1O00151 CREM-226ENST00000469949 721 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5□□□□□ -1.61
PDLIM1O00151 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AC011411.1-201ENST00000509592 876 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC109464.1-201ENST00000511091 819 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC074087.1-201ENST00000512059 724 ntBASIC5□□□□□ -1.61
PDLIM1O00151 RNU6-551P-201ENST00000516661 103 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AP002981.1-201ENST00000517692 975 ntBASIC5□□□□□ -1.61
PDLIM1O00151 IGLVIV-64-201ENST00000518581 301 ntBASIC5□□□□□ -1.61
PDLIM1O00151 NPM1P6-201ENST00000521088 871 ntBASIC5□□□□□ -1.61
PDLIM1O00151 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 DUX4L52-201ENST00000549363 777 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 AC096553.1-201ENST00000605169 829 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC079791.1-201ENST00000605356 973 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AC091979.2-201ENST00000607514 214 ntBASIC5□□□□□ -1.61
PDLIM1O00151 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 SRRM1P3-201ENST00000426911 2678 ntBASIC5□□□□□ -1.61
PDLIM1O00151 MTCO1P8-201ENST00000416914 1523 ntBASIC5□□□□□ -1.61
PDLIM1O00151 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM1O00151 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 LINC01355-201ENST00000566551 5444 ntBASIC5□□□□□ -1.61
PDLIM1O00151 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM1O00151 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM1O00151 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM1O00151 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 AL133268.1-201ENST00000405676 1401 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDLIM1O00151 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM1O00151 GAPDHP15-201ENST00000398586 975 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 CHEK2P5-201ENST00000423877 246 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.99□□□□□ -1.61
PDLIM1O00151 FABP7P2-201ENST00000429946 379 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 AC046176.1-201ENST00000435260 1170 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 AC097523.2-201ENST00000435551 652 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 RPL35AP21-201ENST00000437667 333 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 RPL5P30-201ENST00000465511 891 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AC087672.1-201ENST00000479876 766 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM1O00151 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AGGF1P3-201ENST00000493675 1213 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 RN7SL101P-201ENST00000496350 279 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 OR52A4P-203ENST00000498233 1014 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM1O00151 OR51K1P-201ENST00000510214 950 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AC027544.3-201ENST00000535082 757 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 MTATP6P25-201ENST00000574491 261 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 AC012146.2-201ENST00000576545 416 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 IMMP1LP3-201ENST00000604197 224 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AL158062.1-201ENST00000619632 745 ntBASIC4.99□□□□□ -1.61
PDLIM1O00151 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDLIM1O00151 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
PDLIM1O00151 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM1O00151 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM1O00151 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms