Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 RN7SKP124-201ENST00000364730 341 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 SNORA70.10-201ENST00000384515 134 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 RNA5SP284-201ENST00000384547 118 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 SNORA77-201ENST00000408716 125 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 RPS3P2-201ENST00000421346 701 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 RPS17P2-201ENST00000461663 408 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC090589.1-201ENST00000473109 362 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 NPM1P29-201ENST00000483112 803 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC012339.2-201ENST00000523996 453 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC069307.1-201ENST00000602820 447 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC104687.2-201ENST00000604442 342 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 OR8G7P-201ENST00000616658 848 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC138627.1-204ENST00000641894 765 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 DHX9P1-201ENST00000436565 3076 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 AC009643.2-201ENST00000603543 1448 ntBASIC6.06□□□□□ -1.44
UPF2Q9HAU5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UPF2Q9HAU5 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC008549.2-201ENST00000333482 706 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC012075.1-201ENST00000436549 580 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 NPM1P33-201ENST00000438918 872 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AL161722.1-201ENST00000446972 1032 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 SNORD46.2-201ENST00000516021 102 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 SUGT1P3-202ENST00000604259 383 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AL161912.3-201ENST00000605404 628 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AL118556.2-201ENST00000614375 824 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AL049794.2-201ENST00000616301 365 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC012414.7-202ENST00000622705 1090 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC133552.1-201ENST00000569988 4007 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 AC027290.2-201ENST00000623210 18662 ntBASIC6.05□□□□□ -1.44
UPF2Q9HAU5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
UPF2Q9HAU5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AC240504.1-201ENST00000395709 845 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 RN7SKP199-201ENST00000410325 305 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 RANP7-201ENST00000418085 644 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 CYCSP12-201ENST00000437729 300 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 MTCO3P17-201ENST00000443775 513 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AL354714.3-201ENST00000447284 493 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 NDUFA5P5-201ENST00000468361 342 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AC094085.1-201ENST00000468914 584 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AC027544.3-201ENST00000535082 757 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 AC134349.2-201ENST00000535136 910 ntBASIC6.04□□□□□ -1.44
UPF2Q9HAU5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms