Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 RNU1-106P-201ENST00000384382 164 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 MIR585-201ENST00000384887 94 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 GPS2P1-201ENST00000411761 986 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 HMGB3P5-201ENST00000428894 612 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AL136231.1-201ENST00000429407 730 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 MTND4LP7-201ENST00000431728 294 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC011242.1-201ENST00000433596 1158 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 CEACAMP7-201ENST00000444105 496 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 MTND5P8-201ENST00000449817 1083 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 RPL31P53-201ENST00000457065 348 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC096571.1-202ENST00000506634 735 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC137627.1-201ENST00000545761 289 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 MTCYBP27-201ENST00000555160 670 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 RPL10P14-201ENST00000565265 298 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AF129408.1-201ENST00000608767 431 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC116651.1-201ENST00000609724 556 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 Mico1.1-201ENST00000611698 204 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 CYP4F35P-202ENST00000636121 390 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AC132825.8-201ENST00000640783 297 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 AP001284.1-201ENST00000528393 2118 ntBASIC5.63□□□□□ -1.51
EBF3Q9H4W6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.63□□□□□ -1.51
EBF3Q9H4W6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC125336.1-201ENST00000508893 2827 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 DUTP5-201ENST00000406790 469 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 RPSAP35-201ENST00000413753 818 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 RNGTTP1-201ENST00000420965 728 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 SETP8-201ENST00000435341 628 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 OR52Y1P-201ENST00000452418 828 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AL389915.2-201ENST00000454576 441 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC025768.1-201ENST00000510057 267 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 MTND6P2-201ENST00000512226 524 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 H3F3BP2-201ENST00000583907 357 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC069307.1-201ENST00000602820 447 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AL583832.1-201ENST00000603227 784 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 OR4H6P-202ENST00000603819 340 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 Z99129.2-201ENST00000619967 314 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AC074101.1-201ENST00000637861 241 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
EBF3Q9H4W6 AP001002.1-201ENST00000625148 1513 ntBASIC5.62□□□□□ -1.51
EBF3Q9H4W6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms