Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 TMEM183AP1-205ENST00000432739 290 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 AL353748.1-201ENST00000440753 474 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 AL162739.1-201ENST00000450606 307 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 SNORA59A-201ENST00000459326 152 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 PDCL3P4-201ENST00000489621 720 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 RN7SKP21-201ENST00000516503 220 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 BGLT3-201ENST00000564523 994 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 AC112694.2-201ENST00000623697 768 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 MVP-219ENST00000629059 120 ntTSL 5 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 ZNRD1ASP-221ENST00000637794 1074 ntBASIC1.56□□□□□ -2.16
SYNE1Q8NF91 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
SYNE1Q8NF91 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 EEF1A1P36-201ENST00000427807 1351 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SNORA37-201ENST00000384504 129 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 GAPDHP14-201ENST00000450472 937 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC006427.1-201ENST00000514359 712 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AP001781.1-201ENST00000530977 207 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC095055.1-201ENST00000603472 1113 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC008814.1-201ENST00000603797 406 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC009597.2-201ENST00000604659 592 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC005899.7-201ENST00000618199 588 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL121839.2-201ENST00000565058 6943 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RBPJP2-201ENST00000618187 1444 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RNU1-149P-201ENST00000390870 161 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 COX6CP17-201ENST00000421389 185 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 TBCA-207ENST00000520039 157 ntTSL 3 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AP001804.1-201ENST00000526868 919 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 OR5M2P-201ENST00000529003 936 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC019322.1-201ENST00000571869 389 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC005084.1-201ENST00000605160 304 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC004836.1-201ENST00000623032 634 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RPL12P43-201ENST00000420608 499 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 BMS1P19-201ENST00000433925 393 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 SEPT10P1-201ENST00000517342 1162 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC034205.1-201ENST00000520621 638 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 OR4A43P-201ENST00000532938 908 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC034105.4-201ENST00000568304 277 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MIR4277-201ENST00000578298 84 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 TEX41-238ENST00000604253 709 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC026951.1-201ENST00000559530 2459 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC093671.1-201ENST00000624981 2929 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 MFSD8-216ENST00000641147 4009 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AL354766.1-201ENST00000423396 542 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 EEF1A1P1-201ENST00000447052 739 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RBMY2TP-201ENST00000451162 947 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC109327.1-201ENST00000471666 403 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 ATP5LP5-201ENST00000483050 299 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 RN7SL423P-201ENST00000486202 304 ntBASIC1.55□□□□□ -2.16
SYNE1Q8NF91 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms