Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL606834.3-201ENST00000602615 496 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC108738.1-201ENST00000603703 237 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC245100.7-201ENST00000609678 442 ntBASIC4.99□□□□□ -1.61
SHFQ7M4L6 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHFQ7M4L6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.99□□□□□ -1.61
SHFQ7M4L6 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 MTCO1P7-201ENST00000419523 1542 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 MUC2-202ENST00000613187 4845 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AL078621.3-201ENST00000623707 2042 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC234772.1-201ENST00000377927 937 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 SNORD56.6-201ENST00000384569 71 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 ATP5HP3-201ENST00000396994 486 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 PPIAP9-201ENST00000403866 498 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 ATF1P1-201ENST00000406040 927 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 SNORA79B-201ENST00000410557 148 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 PTP4A1P7-201ENST00000423476 514 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 MTATP6P17-201ENST00000431030 672 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 MED6P1-201ENST00000439659 713 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 TCEA1P3-201ENST00000443005 880 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 EEF1B2P3-201ENST00000447718 678 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AZGP1P2-201ENST00000454506 345 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC107398.1-201ENST00000486904 505 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC009120.1-201ENST00000493458 473 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC008427.1-201ENST00000503102 655 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC090568.1-201ENST00000509499 856 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 RNA5SP340-201ENST00000517132 107 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC092709.1-201ENST00000521355 1045 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC138207.8-204ENST00000579588 527 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC025175.1-201ENST00000606482 759 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 OR7A19P-201ENST00000608051 733 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 RMST_10.1-201ENST00000616309 154 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AL590396.4-201ENST00000636779 956 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC006927.2-201ENST00000639256 389 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC007342.7-201ENST00000624610 2337 ntBASIC4.98□□□□□ -1.61
SHFQ7M4L6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SHFQ7M4L6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHFQ7M4L6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.97□□□□□ -1.61
SHFQ7M4L6 LYARP1-201ENST00000436977 1501 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 AC008079.2-201ENST00000623543 20396 ntBASIC4.97□□□□□ -1.61
SHFQ7M4L6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHFQ7M4L6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms