Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC023490.2-201ENST00000359859 470 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 OR10R3P-201ENST00000361688 942 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 RNA5SP273-201ENST00000362484 113 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 RN7SKP15-201ENST00000364742 309 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 Y_RNA.465-201ENST00000384293 102 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL079342.2-201ENST00000403367 482 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC016739.1-201ENST00000405359 345 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL445213.1-201ENST00000412589 747 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 MYL6P5-201ENST00000412707 459 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 LINC01347-201ENST00000417964 355 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 BX284632.2-201ENST00000421091 399 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC016027.5-201ENST00000427227 210 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 KCTD9P1-201ENST00000430462 1167 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL512605.1-202ENST00000441919 381 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 BMS1P10-201ENST00000443754 1120 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL359955.2-201ENST00000445380 353 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 TAF9P1-201ENST00000445421 515 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL606662.1-201ENST00000445763 553 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC144530.1-201ENST00000452862 555 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 TAF9P2-201ENST00000454958 515 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 CDC42P1-201ENST00000456658 548 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 RN7SL269P-201ENST00000467795 305 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 OR5H7P-201ENST00000514084 930 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 RPL12P22-201ENST00000519073 490 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AK6-205ENST00000618980 483 ntTSL 2 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC010435.1-201ENST00000623353 1177 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AL596275.2-208ENST00000641192 594 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 ICE2P1-201ENST00000512800 1849 ntBASIC8.36□□□□□ -1.07
CDCA8Q53HL2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDCA8Q53HL2 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AF287957.1-201ENST00000607368 1595 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 RNU6-353P-201ENST00000364266 108 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL121977.1-201ENST00000401636 979 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 HMGN1P20-201ENST00000411849 300 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC010385.1-201ENST00000412374 256 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC098592.1-201ENST00000419352 333 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 OR5BE1P-201ENST00000425977 939 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 MOB1AP1-201ENST00000430903 535 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL035407.2-201ENST00000454090 378 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL122020.1-201ENST00000472287 459 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 RPL30P6-201ENST00000475925 342 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 CCDC11P1-201ENST00000503137 1162 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC093755.1-201ENST00000512950 1023 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 Y_RNA.667-201ENST00000516212 107 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC060788.1-201ENST00000521318 469 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 WBP1LP3-201ENST00000523033 208 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC007494.1-201ENST00000562293 760 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC095057.3-201ENST00000567102 1157 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC008759.1-201ENST00000589783 983 ntBASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.35□□□□□ -1.07
CDCA8Q53HL2 AL031281.1-201ENST00000604049 488 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms