Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL450023.3-201ENST00000440592 271 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 CBX1P2-201ENST00000453841 458 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 HMGB1P4-201ENST00000455362 567 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AC091180.1-201ENST00000462104 372 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AC063949.1-201ENST00000552900 865 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 NDUFB4P11-201ENST00000560510 395 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AL391358.1-201ENST00000605342 190 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 MFSD8-216ENST00000641147 4009 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AC233968.1-201ENST00000611212 1300 ntBASIC6.05□□□□□ -1.44
PDS5AQ29RF7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.05□□□□□ -1.44
PDS5AQ29RF7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AP005432.1-201ENST00000580891 3485 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 RN7SKP103-201ENST00000363848 320 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 MTND3P20-201ENST00000407663 186 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 U3.32-201ENST00000408116 212 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 RN7SKP100-201ENST00000411258 284 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 RPL12P9-201ENST00000412942 488 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 RPL12P43-201ENST00000420608 499 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC008072.1-201ENST00000434254 824 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 OR52J1P-201ENST00000450596 932 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 FCF1P7-201ENST00000451185 558 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 PRPF38AP1-201ENST00000451976 933 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL513533.1-201ENST00000453728 415 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 UBE2FP2-201ENST00000566646 462 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC104785.1-201ENST00000603220 588 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL031320.1-201ENST00000604177 357 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC243960.7-201ENST00000623532 707 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC125336.1-201ENST00000508893 2827 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 ECM1P2-201ENST00000503354 1577 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 HSPA8P14-201ENST00000552265 1805 ntBASIC6.04□□□□□ -1.44
PDS5AQ29RF7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
PDS5AQ29RF7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 LRRC37BP1-201ENST00000398851 714 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AL035079.1-201ENST00000405210 287 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 OR2A3P-201ENST00000493774 953 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AL671862.1-201ENST00000515851 349 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 RNA5SP392-201ENST00000516905 112 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC090286.3-201ENST00000573133 187 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 MIR3667-201ENST00000581025 74 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC020910.3-201ENST00000603701 874 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AL136295.6-201ENST00000610486 658 ntBASIC6.03□□□□□ -1.44
PDS5AQ29RF7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms