Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCNA1P78396 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.85□□□□□ -1.47
CCNA1P78396 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 OR9G4-201ENST00000302957 984 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC079741.1-201ENST00000321498 212 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 RNU1-32P-201ENST00000363937 159 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 MIR589-201ENST00000385238 99 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 U3.23-201ENST00000391132 200 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 DNAJC19P7-201ENST00000428811 344 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 RPL7P11-201ENST00000437586 658 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC009963.4-201ENST00000448535 339 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 RBMY2TP-201ENST00000451162 947 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC020779.1-201ENST00000478757 796 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 RN7SL459P-201ENST00000481078 302 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 AC111000.5-201ENST00000506559 1178 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.84□□□□□ -1.47
CCNA1P78396 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 AP001357.1-201ENST00000586304 1053 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 AL391358.1-201ENST00000605342 190 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.84□□□□□ -1.47
CCNA1P78396 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCNA1P78396 MTND5P23-201ENST00000430812 1655 ntBASIC5.84□□□□□ -1.47
CCNA1P78396 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCNA1P78396 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CCNA1P78396 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.84□□□□□ -1.48
CCNA1P78396 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
CCNA1P78396 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 AC004076.2-201ENST00000620532 3323 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 AC004656.1-201ENST00000568479 4951 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
CCNA1P78396 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCNA1P78396 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.83□□□□□ -1.48
CCNA1P78396 RNA5SP113-201ENST00000410486 84 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 ARAFP2-201ENST00000440565 559 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 RPL5P25-201ENST00000441148 775 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.83□□□□□ -1.48
CCNA1P78396 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.83□□□□□ -1.48
CCNA1P78396 AC096741.1-201ENST00000472250 846 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 SNRPCP3-201ENST00000474888 476 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 IGBP1P4-201ENST00000503202 879 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 AC010350.1-201ENST00000504908 231 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 AC097173.1-201ENST00000505862 819 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.83□□□□□ -1.48
CCNA1P78396 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.83□□□□□ -1.48
CCNA1P78396 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.83□□□□□ -1.48
CCNA1P78396 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.83□□□□□ -1.48
CCNA1P78396 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCNA1P78396 AC108738.1-201ENST00000603703 237 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 AC008745.1-201ENST00000604064 271 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.83□□□□□ -1.48
CCNA1P78396 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 AC012414.7-202ENST00000622705 1090 ntBASIC5.83□□□□□ -1.48
CCNA1P78396 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CCNA1P78396 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCNA1P78396 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCNA1P78396 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.82□□□□□ -1.48
CCNA1P78396 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.82□□□□□ -1.48
CCNA1P78396 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCNA1P78396 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms