Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC092902.1-201ENST00000486999 259 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC093801.2-201ENST00000503966 1050 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.36□□□□□ -1.71
LMO4P61968 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.36□□□□□ -1.71
LMO4P61968 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.36□□□□□ -1.71
LMO4P61968 AC079064.1-201ENST00000528365 362 ntBASIC4.36□□□□□ -1.71
LMO4P61968 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.36□□□□□ -1.71
LMO4P61968 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 AP002373.2-201ENST00000541631 1060 ntBASIC4.36□□□□□ -1.71
LMO4P61968 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 AC016839.1-201ENST00000578162 867 ntBASIC4.36□□□□□ -1.71
LMO4P61968 SNORD39.2-201ENST00000579995 76 ntBASIC4.36□□□□□ -1.71
LMO4P61968 MIR4436B2-201ENST00000581415 91 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
LMO4P61968 MIR4436B1-201ENST00000583272 91 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC040174.2-201ENST00000602701 465 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC006946.3-201ENST00000609791 756 ntBASIC4.36□□□□□ -1.71
LMO4P61968 Mico1.1-201ENST00000611698 204 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AL049539.1-201ENST00000611964 459 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AL352984.2-202ENST00000613699 155 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AP000484.1-201ENST00000620067 1252 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC021422.1-201ENST00000621212 473 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC015660.5-201ENST00000623238 564 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 AC099654.6-201ENST00000636487 512 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC135068.12-201ENST00000637370 931 ntBASIC4.36□□□□□ -1.71
LMO4P61968 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.36□□□□□ -1.71
LMO4P61968 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LMO4P61968 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.36□□□□□ -1.71
LMO4P61968 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.36□□□□□ -1.71
LMO4P61968 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMO4P61968 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.35□□□□□ -1.71
LMO4P61968 THAP12P4-201ENST00000528321 2266 ntBASIC4.35□□□□□ -1.71
LMO4P61968 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 AP000547.3-204ENST00000588548 2523 ntBASIC4.35□□□□□ -1.71
LMO4P61968 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.35□□□□□ -1.71
LMO4P61968 AC004076.2-201ENST00000620532 3323 ntBASIC4.35□□□□□ -1.71
LMO4P61968 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.35□□□□□ -1.71
LMO4P61968 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 SNURFL-201ENST00000309296 343 ntBASIC4.35□□□□□ -1.71
LMO4P61968 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 RNA5SP514-201ENST00000363717 111 ntBASIC4.35□□□□□ -1.71
LMO4P61968 RNU6-670P-201ENST00000364312 104 ntBASIC4.35□□□□□ -1.71
LMO4P61968 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 RNU6-1263P-201ENST00000384601 106 ntBASIC4.35□□□□□ -1.71
LMO4P61968 MIR585-201ENST00000384887 94 ntBASIC4.35□□□□□ -1.71
LMO4P61968 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.35□□□□□ -1.71
LMO4P61968 MIR1182-201ENST00000408363 97 ntBASIC4.35□□□□□ -1.71
LMO4P61968 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.35□□□□□ -1.71
LMO4P61968 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 NPM1P26-201ENST00000426339 738 ntBASIC4.35□□□□□ -1.71
LMO4P61968 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 PA2G4P6-201ENST00000438325 1197 ntBASIC4.35□□□□□ -1.71
LMO4P61968 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 MTCYBP11-201ENST00000447254 1109 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 RBMY2TP-201ENST00000451162 947 ntBASIC4.35□□□□□ -1.71
LMO4P61968 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 DNAJB5P1-201ENST00000454004 806 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 snoU13.29-201ENST00000459370 104 ntBASIC4.35□□□□□ -1.71
LMO4P61968 RPL35AP28-201ENST00000459730 331 ntBASIC4.35□□□□□ -1.71
LMO4P61968 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMO4P61968 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.35□□□□□ -1.71
LMO4P61968 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.35□□□□□ -1.71
LMO4P61968 AC098862.1-201ENST00000504991 413 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AC004980.4-201ENST00000513375 203 ntBASIC4.35□□□□□ -1.71
LMO4P61968 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.35□□□□□ -1.71
LMO4P61968 AP001922.4-201ENST00000526967 290 ntBASIC4.35□□□□□ -1.71
LMO4P61968 EIF4A2P5-201ENST00000529914 499 ntBASIC4.35□□□□□ -1.71
LMO4P61968 OR4A43P-201ENST00000532938 908 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms