Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH4P55283 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CDH4P55283 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH4P55283 AC105254.2-201ENST00000603636 436 ntBASIC5.22□□□□□ -1.57
CDH4P55283 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH4P55283 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH4P55283 AL627230.1-201ENST00000613077 211 ntBASIC5.22□□□□□ -1.57
CDH4P55283 AL354950.1-201ENST00000614150 568 ntBASIC5.22□□□□□ -1.57
CDH4P55283 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH4P55283 AC108359.1-201ENST00000616451 1211 ntBASIC5.22□□□□□ -1.57
CDH4P55283 AL591926.8-201ENST00000616876 211 ntBASIC5.22□□□□□ -1.57
CDH4P55283 AP003400.2-201ENST00000624036 666 ntBASIC5.22□□□□□ -1.57
CDH4P55283 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH4P55283 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH4P55283 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH4P55283 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH4P55283 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CDH4P55283 AC022417.1-201ENST00000624768 1303 ntBASIC5.22□□□□□ -1.57
CDH4P55283 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH4P55283 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CDH4P55283 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CDH4P55283 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.21□□□□□ -1.57
CDH4P55283 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 MUC2-202ENST00000613187 4845 ntBASIC5.21□□□□□ -1.58
CDH4P55283 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 AC007618.1-201ENST00000366455 732 ntBASIC5.21□□□□□ -1.58
CDH4P55283 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 Z97832.1-201ENST00000402490 328 ntBASIC5.21□□□□□ -1.58
CDH4P55283 AL035079.1-201ENST00000405210 287 ntBASIC5.21□□□□□ -1.58
CDH4P55283 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 BX323845.1-201ENST00000432417 179 ntBASIC5.21□□□□□ -1.58
CDH4P55283 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 RPL34P20-201ENST00000442771 351 ntBASIC5.21□□□□□ -1.58
CDH4P55283 AC239798.3-201ENST00000454459 408 ntBASIC5.21□□□□□ -1.58
CDH4P55283 AC098583.1-201ENST00000480875 255 ntBASIC5.21□□□□□ -1.58
CDH4P55283 RN7SL97P-201ENST00000486780 299 ntBASIC5.21□□□□□ -1.58
CDH4P55283 RPL32P9-201ENST00000487963 407 ntBASIC5.21□□□□□ -1.58
CDH4P55283 RN7SL441P-201ENST00000492388 296 ntBASIC5.21□□□□□ -1.58
CDH4P55283 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH4P55283 AC010350.1-201ENST00000504908 231 ntBASIC5.21□□□□□ -1.58
CDH4P55283 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH4P55283 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH4P55283 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH4P55283 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH4P55283 MIR4691-201ENST00000583764 85 ntBASIC5.21□□□□□ -1.58
CDH4P55283 PRPF19P1-201ENST00000584766 898 ntBASIC5.21□□□□□ -1.58
CDH4P55283 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
CDH4P55283 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH4P55283 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH4P55283 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 AL589647.1-201ENST00000402485 466 ntBASIC5.2□□□□□ -1.58
CDH4P55283 COX5BP7-201ENST00000414780 274 ntBASIC5.2□□□□□ -1.58
CDH4P55283 HYALP1-201ENST00000417674 1279 ntBASIC5.2□□□□□ -1.58
CDH4P55283 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH4P55283 TRGV7-201ENST00000427089 353 ntBASIC5.2□□□□□ -1.58
CDH4P55283 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 OR7E125P-201ENST00000443450 846 ntBASIC5.2□□□□□ -1.58
CDH4P55283 PRPF38AP1-201ENST00000451976 933 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH4P55283 AC008410.1-201ENST00000483777 339 ntBASIC5.2□□□□□ -1.58
CDH4P55283 OR11I1P-201ENST00000486033 954 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AC005412.2-201ENST00000492004 341 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AL049874.2-201ENST00000492636 288 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH4P55283 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH4P55283 NDUFB4P11-201ENST00000560510 395 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH4P55283 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH4P55283 MIR4646-201ENST00000580775 63 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AC018695.5-201ENST00000605872 315 ntBASIC5.2□□□□□ -1.58
CDH4P55283 AC067838.1-201ENST00000606064 577 ntBASIC5.2□□□□□ -1.58
CDH4P55283 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH4P55283 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms