Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC009506.2-201ENST00000420635 840 ntBASIC5.15□□□□□ -1.59
PDX1P52945 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDX1P52945 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 RIMKLBP2-201ENST00000424737 654 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC009784.1-201ENST00000426484 460 ntBASIC5.15□□□□□ -1.59
PDX1P52945 RPL7P56-201ENST00000429441 717 ntBASIC5.15□□□□□ -1.59
PDX1P52945 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.15□□□□□ -1.59
PDX1P52945 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDX1P52945 NDUFB4P8-201ENST00000435351 367 ntBASIC5.15□□□□□ -1.59
PDX1P52945 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 ARL5AP3-201ENST00000439327 386 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC073465.2-201ENST00000440938 498 ntBASIC5.15□□□□□ -1.59
PDX1P52945 Z99127.2-201ENST00000441426 334 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC092647.3-201ENST00000443044 633 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 IGBP1P3-201ENST00000447449 1000 ntBASIC5.15□□□□□ -1.59
PDX1P52945 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 AC009127.1-201ENST00000467090 155 ntBASIC5.15□□□□□ -1.59
PDX1P52945 RN7SL188P-201ENST00000469842 285 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 AC097486.1-201ENST00000515331 210 ntBASIC5.15□□□□□ -1.59
PDX1P52945 RN7SKP147-201ENST00000517154 244 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 AC005341.1-201ENST00000571086 708 ntBASIC5.15□□□□□ -1.59
PDX1P52945 TMF1P1-201ENST00000576058 373 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 AC011447.4-201ENST00000587562 111 ntBASIC5.15□□□□□ -1.59
PDX1P52945 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.15□□□□□ -1.59
PDX1P52945 AP000769.2-201ENST00000602344 396 ntBASIC5.15□□□□□ -1.59
PDX1P52945 QTRT1P1-201ENST00000604344 1078 ntBASIC5.15□□□□□ -1.59
PDX1P52945 AL139124.1-201ENST00000609123 421 ntBASIC5.15□□□□□ -1.59
PDX1P52945 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.15□□□□□ -1.59
PDX1P52945 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDX1P52945 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
PDX1P52945 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDX1P52945 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDX1P52945 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.15□□□□□ -1.59
PDX1P52945 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.15□□□□□ -1.59
PDX1P52945 AC079097.1-201ENST00000512187 1399 ntBASIC5.15□□□□□ -1.59
PDX1P52945 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDX1P52945 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PDX1P52945 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDX1P52945 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDX1P52945 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 Y_RNA.110-201ENST00000363220 99 ntBASIC5.14□□□□□ -1.59
PDX1P52945 RN7SKP103-201ENST00000363848 320 ntBASIC5.14□□□□□ -1.59
PDX1P52945 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 RNU6-40P-201ENST00000384254 107 ntBASIC5.14□□□□□ -1.59
PDX1P52945 ST13P16-201ENST00000401760 781 ntBASIC5.14□□□□□ -1.59
PDX1P52945 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.14□□□□□ -1.59
PDX1P52945 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 RNF19BPX-201ENST00000426224 625 ntBASIC5.14□□□□□ -1.59
PDX1P52945 RPL12P17-201ENST00000432393 498 ntBASIC5.14□□□□□ -1.59
PDX1P52945 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.14□□□□□ -1.59
PDX1P52945 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AC104634.1-201ENST00000452720 462 ntBASIC5.14□□□□□ -1.59
PDX1P52945 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.14□□□□□ -1.59
PDX1P52945 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 Z92846.1-201ENST00000456203 268 ntBASIC5.14□□□□□ -1.59
PDX1P52945 RPS3AP41-201ENST00000462701 778 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AC083982.1-201ENST00000485679 344 ntBASIC5.14□□□□□ -1.59
PDX1P52945 IGLV2-34-201ENST00000490007 283 ntBASIC5.14□□□□□ -1.59
PDX1P52945 RN7SL591P-201ENST00000496150 292 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC105233.1-201ENST00000498840 781 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.14□□□□□ -1.59
PDX1P52945 AC004980.4-201ENST00000513375 203 ntBASIC5.14□□□□□ -1.59
PDX1P52945 SETP12-201ENST00000514068 805 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC067904.2-201ENST00000517322 1283 ntBASIC5.14□□□□□ -1.59
PDX1P52945 HIGD1AP5-201ENST00000529959 259 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 MIR4480-201ENST00000582492 71 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 AC009237.13-201ENST00000603193 276 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC087783.2-201ENST00000605070 562 ntBASIC5.14□□□□□ -1.59
PDX1P52945 RNU6-84P-201ENST00000607737 102 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AL133445.2-201ENST00000611191 527 ntBASIC5.14□□□□□ -1.59
PDX1P52945 RNA5SP439-201ENST00000617595 124 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AL356490.1-201ENST00000623079 479 ntBASIC5.14□□□□□ -1.59
PDX1P52945 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
PDX1P52945 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.14□□□□□ -1.59
PDX1P52945 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms