Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 HMGB3P7-201ENST00000400214 611 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 ST13P16-201ENST00000401760 781 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 MIR1178-201ENST00000408396 91 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 MTND4P24-201ENST00000424002 397 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC093655.2-201ENST00000425735 631 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 MTND2P40-201ENST00000436718 841 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC073465.2-201ENST00000440938 498 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 Z99127.2-201ENST00000441426 334 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 XKRY2-201ENST00000442362 1093 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AL035090.1-201ENST00000454835 332 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 RPL7P6-201ENST00000480903 738 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 UBA52P7-201ENST00000486088 380 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC092902.1-201ENST00000486999 259 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.31□□□□□ -1.56
CLCNKAP51800 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC111000.6-201ENST00000514471 709 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 RNU6-319P-201ENST00000516025 108 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 CDC42P3-201ENST00000518493 633 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 OR4A17P-201ENST00000526032 904 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 OR8Q1P-201ENST00000526467 655 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 MTND5P21-201ENST00000531961 522 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC010503.3-201ENST00000594355 540 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AP000769.2-201ENST00000602344 396 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.31□□□□□ -1.56
CLCNKAP51800 AL139124.1-201ENST00000609123 421 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC110792.4-201ENST00000609843 298 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC109583.2-201ENST00000617367 129 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC138965.3-201ENST00000623875 498 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 AC005618.4-201ENST00000625053 554 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 AL590763.1-201ENST00000398297 1545 ntBASIC5.31□□□□□ -1.56
CLCNKAP51800 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.31□□□□□ -1.56
CLCNKAP51800 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLCNKAP51800 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLCNKAP51800 AC079097.1-201ENST00000512187 1399 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC009501.3-201ENST00000605001 1352 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCNKAP51800 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCNKAP51800 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCNKAP51800 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCNKAP51800 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCNKAP51800 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCNKAP51800 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CLCNKAP51800 DBIP1-201ENST00000401435 260 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.3□□□□□ -1.56
CLCNKAP51800 AL354692.1-201ENST00000423044 315 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC099670.2-201ENST00000435130 321 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 CNOT7P2-201ENST00000441051 832 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCNKAP51800 MYO5BP2-201ENST00000449815 1277 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 RN7SL172P-201ENST00000460535 303 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCNKAP51800 RPS4XP1-201ENST00000482189 787 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 OR11I1P-201ENST00000486033 954 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.3□□□□□ -1.56
CLCNKAP51800 AC093763.2-201ENST00000505334 1223 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC016550.1-201ENST00000505348 785 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC008638.1-201ENST00000506035 866 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC091912.1-201ENST00000511351 248 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC067904.2-201ENST00000517322 1283 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AP003102.1-201ENST00000525638 661 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AP004607.2-201ENST00000533949 322 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CLCNKAP51800 MIR1269B-201ENST00000580405 75 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 RN7SL356P-201ENST00000582228 248 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC015911.5-201ENST00000587076 451 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.3□□□□□ -1.56
CLCNKAP51800 AC090330.1-201ENST00000588646 764 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 AL391834.1-201ENST00000609609 560 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 CR589904.2-201ENST00000612533 440 ntBASIC5.3□□□□□ -1.56
CLCNKAP51800 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CLCNKAP51800 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms