Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC009237.13-201ENST00000603193 276 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 AC025175.1-201ENST00000606482 759 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.96□□□□□ -1.62
APOBEC1P41238 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.96□□□□□ -1.62
APOBEC1P41238 AC026124.2-201ENST00000621847 656 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 AC023510.2-201ENST00000622162 746 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.96□□□□□ -1.62
APOBEC1P41238 AC103703.1-201ENST00000634783 663 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 TMEM30CP-203ENST00000637814 1035 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 AL445984.1-201ENST00000637834 659 ntBASIC4.96□□□□□ -1.62
APOBEC1P41238 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.96□□□□□ -1.62
APOBEC1P41238 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.96□□□□□ -1.62
APOBEC1P41238 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
APOBEC1P41238 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.96□□□□□ -1.62
APOBEC1P41238 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
APOBEC1P41238 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
APOBEC1P41238 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
APOBEC1P41238 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 PROS2P-201ENST00000474651 1951 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 AC003973.3-201ENST00000624863 2822 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
APOBEC1P41238 SNORA72.3-201ENST00000365074 132 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 AL024507.1-201ENST00000412741 274 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.95□□□□□ -1.62
APOBEC1P41238 VTI1BP4-201ENST00000427516 527 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.95□□□□□ -1.62
APOBEC1P41238 NPM1P18-201ENST00000434232 732 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.95□□□□□ -1.62
APOBEC1P41238 RPS27P5-201ENST00000444247 244 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AL672138.1-201ENST00000450604 1015 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 RN7SL51P-201ENST00000468230 285 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
APOBEC1P41238 RPL12P24-201ENST00000474907 486 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AP000797.2-201ENST00000475768 606 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.95□□□□□ -1.62
APOBEC1P41238 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.95□□□□□ -1.62
APOBEC1P41238 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.95□□□□□ -1.62
APOBEC1P41238 AC109464.1-201ENST00000511091 819 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 MIR4310-201ENST00000582950 57 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.95□□□□□ -1.62
APOBEC1P41238 AC104695.2-201ENST00000605056 775 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AC026979.4-201ENST00000606555 645 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.95□□□□□ -1.62
APOBEC1P41238 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.95□□□□□ -1.62
APOBEC1P41238 AL356118.1-201ENST00000635272 1078 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 AP005435.3-201ENST00000531260 3198 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.95□□□□□ -1.62
APOBEC1P41238 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.95□□□□□ -1.62
APOBEC1P41238 AC008432.1-201ENST00000615912 1320 ntBASIC4.95□□□□□ -1.62
APOBEC1P41238 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.95□□□□□ -1.62
APOBEC1P41238 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
APOBEC1P41238 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
APOBEC1P41238 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 RN7SKP124-201ENST00000364730 341 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 SNORA70.6-201ENST00000383934 134 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.94□□□□□ -1.62
APOBEC1P41238 XKRYP4-201ENST00000414395 483 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC013262.1-201ENST00000426710 252 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 GAPDHP34-201ENST00000432112 823 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AP000281.1-201ENST00000444036 316 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 AL096829.2-201ENST00000446582 742 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC105399.1-202ENST00000447303 205 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 XKRYP5-201ENST00000449659 483 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 MTATP6P14-201ENST00000455189 673 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC018635.1-201ENST00000468292 1030 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 CYCSP20-201ENST00000473154 315 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC020779.1-201ENST00000478757 796 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 RPL7P51-201ENST00000490532 749 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 RN7SL466P-201ENST00000497546 295 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms