Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RPS26P13-201ENST00000419030 330 ntBASIC4.46□□□□□ -1.7
USF1P22415 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 FABP7P2-201ENST00000429946 379 ntBASIC4.46□□□□□ -1.7
USF1P22415 NDUFB4P8-201ENST00000435351 367 ntBASIC4.46□□□□□ -1.7
USF1P22415 PA2G4P6-201ENST00000438325 1197 ntBASIC4.46□□□□□ -1.7
USF1P22415 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.46□□□□□ -1.7
USF1P22415 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 H2AFZP6-201ENST00000444403 394 ntBASIC4.46□□□□□ -1.7
USF1P22415 AZGP1P2-201ENST00000454506 345 ntBASIC4.46□□□□□ -1.7
USF1P22415 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 AP000797.2-201ENST00000475768 606 ntBASIC4.46□□□□□ -1.7
USF1P22415 BX284632.1-201ENST00000478218 541 ntBASIC4.46□□□□□ -1.7
USF1P22415 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 RNU6-513P-201ENST00000516104 104 ntBASIC4.46□□□□□ -1.7
USF1P22415 RNA5SP230-201ENST00000517039 122 ntBASIC4.46□□□□□ -1.7
USF1P22415 AC079064.1-201ENST00000528365 362 ntBASIC4.46□□□□□ -1.7
USF1P22415 YWHABP2-201ENST00000540201 713 ntBASIC4.46□□□□□ -1.7
USF1P22415 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.46□□□□□ -1.7
USF1P22415 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.46□□□□□ -1.7
USF1P22415 AC005084.1-201ENST00000605160 304 ntBASIC4.46□□□□□ -1.7
USF1P22415 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.46□□□□□ -1.7
USF1P22415 AL356608.1-201ENST00000610034 820 ntBASIC4.46□□□□□ -1.7
USF1P22415 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.46□□□□□ -1.7
USF1P22415 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.46□□□□□ -1.7
USF1P22415 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
USF1P22415 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USF1P22415 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.45□□□□□ -1.7
USF1P22415 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.45□□□□□ -1.7
USF1P22415 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
USF1P22415 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 MIR600-201ENST00000385007 98 ntBASIC4.45□□□□□ -1.7
USF1P22415 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.45□□□□□ -1.7
USF1P22415 VN1R31P-201ENST00000417498 730 ntBASIC4.45□□□□□ -1.7
USF1P22415 RPA2P2-201ENST00000419698 796 ntBASIC4.45□□□□□ -1.7
USF1P22415 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.45□□□□□ -1.7
USF1P22415 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.45□□□□□ -1.7
USF1P22415 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 AC090114.3-201ENST00000479267 829 ntBASIC4.45□□□□□ -1.7
USF1P22415 AC004980.4-201ENST00000513375 203 ntBASIC4.45□□□□□ -1.7
USF1P22415 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.45□□□□□ -1.7
USF1P22415 RNA5SP228-201ENST00000516232 133 ntBASIC4.45□□□□□ -1.7
USF1P22415 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.45□□□□□ -1.7
USF1P22415 BRD9P1-201ENST00000529855 560 ntBASIC4.45□□□□□ -1.7
USF1P22415 HIGD1AP5-201ENST00000529959 259 ntBASIC4.45□□□□□ -1.7
USF1P22415 CR383656.6-201ENST00000550518 394 ntBASIC4.45□□□□□ -1.7
USF1P22415 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
USF1P22415 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.45□□□□□ -1.7
USF1P22415 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.45□□□□□ -1.7
USF1P22415 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USF1P22415 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USF1P22415 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.45□□□□□ -1.7
USF1P22415 MIR4480-201ENST00000582492 71 ntBASIC4.45□□□□□ -1.7
USF1P22415 AC005252.1-201ENST00000604518 1063 ntBASIC4.45□□□□□ -1.7
USF1P22415 AC010632.3-201ENST00000611377 369 ntBASIC4.45□□□□□ -1.7
USF1P22415 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.45□□□□□ -1.7
USF1P22415 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USF1P22415 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USF1P22415 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.44□□□□□ -1.7
USF1P22415 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
USF1P22415 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USF1P22415 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USF1P22415 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USF1P22415 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.44□□□□□ -1.7
USF1P22415 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.44□□□□□ -1.7
USF1P22415 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms