Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.69□□□□□ -1.5
RB1P06400 AC092754.1-201ENST00000472975 479 ntBASIC5.69□□□□□ -1.5
RB1P06400 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.69□□□□□ -1.5
RB1P06400 AC093267.1-201ENST00000489176 961 ntBASIC5.69□□□□□ -1.5
RB1P06400 PDCL3P4-201ENST00000489621 720 ntBASIC5.69□□□□□ -1.5
RB1P06400 AC090543.1-201ENST00000492168 485 ntBASIC5.69□□□□□ -1.5
RB1P06400 RN7SL591P-201ENST00000496150 292 ntBASIC5.69□□□□□ -1.5
RB1P06400 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.69□□□□□ -1.5
RB1P06400 HMGB1P47-201ENST00000511281 589 ntBASIC5.69□□□□□ -1.5
RB1P06400 AL671862.1-201ENST00000515851 349 ntBASIC5.69□□□□□ -1.5
RB1P06400 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.69□□□□□ -1.5
RB1P06400 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.69□□□□□ -1.5
RB1P06400 MIR4697-201ENST00000582977 78 ntBASIC5.69□□□□□ -1.5
RB1P06400 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.69□□□□□ -1.5
RB1P06400 AC234771.5-201ENST00000600161 514 ntBASIC5.69□□□□□ -1.5
RB1P06400 AC093388.1-201ENST00000609166 430 ntBASIC5.69□□□□□ -1.5
RB1P06400 AL158062.1-201ENST00000619632 745 ntBASIC5.69□□□□□ -1.5
RB1P06400 AC006213.5-201ENST00000619673 288 ntBASIC5.69□□□□□ -1.5
RB1P06400 AC020923.1-201ENST00000624021 917 ntBASIC5.69□□□□□ -1.5
RB1P06400 MIR7641-1-201ENST00000627518 61 ntBASIC5.69□□□□□ -1.5
RB1P06400 CFTRP2-201ENST00000634304 199 ntBASIC5.69□□□□□ -1.5
RB1P06400 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.69□□□□□ -1.5
RB1P06400 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.69□□□□□ -1.5
RB1P06400 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.69□□□□□ -1.5
RB1P06400 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RB1P06400 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RB1P06400 HSPD1P7-201ENST00000447985 1686 ntBASIC5.69□□□□□ -1.5
RB1P06400 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 AC239868.2-201ENST00000564237 4527 ntBASIC5.68□□□□□ -1.5
RB1P06400 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RB1P06400 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 RPL10P10-201ENST00000403509 664 ntBASIC5.68□□□□□ -1.5
RB1P06400 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 AC092651.1-201ENST00000426110 312 ntBASIC5.68□□□□□ -1.5
RB1P06400 FAR1P1-201ENST00000427163 934 ntBASIC5.68□□□□□ -1.5
RB1P06400 EIF2S2P3-201ENST00000428356 999 ntBASIC5.68□□□□□ -1.5
RB1P06400 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.68□□□□□ -1.5
RB1P06400 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.68□□□□□ -1.5
RB1P06400 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.68□□□□□ -1.5
RB1P06400 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 IGBP1P3-201ENST00000447449 1000 ntBASIC5.68□□□□□ -1.5
RB1P06400 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.68□□□□□ -1.5
RB1P06400 SNORD125-201ENST00000459538 96 ntBASIC5.68□□□□□ -1.5
RB1P06400 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 RN7SL481P-201ENST00000477764 299 ntBASIC5.68□□□□□ -1.5
RB1P06400 RN7SL423P-201ENST00000486202 304 ntBASIC5.68□□□□□ -1.5
RB1P06400 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.68□□□□□ -1.5
RB1P06400 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.68□□□□□ -1.5
RB1P06400 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.68□□□□□ -1.5
RB1P06400 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.68□□□□□ -1.5
RB1P06400 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.68□□□□□ -1.5
RB1P06400 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.68□□□□□ -1.5
RB1P06400 RN7SL356P-201ENST00000582228 248 ntBASIC5.68□□□□□ -1.5
RB1P06400 AL023583.1-201ENST00000607518 1143 ntBASIC5.68□□□□□ -1.5
RB1P06400 AL356094.1-201ENST00000624663 1212 ntBASIC5.68□□□□□ -1.5
RB1P06400 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.68□□□□□ -1.5
RB1P06400 AC093671.1-201ENST00000624981 2929 ntBASIC5.68□□□□□ -1.5
RB1P06400 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RB1P06400 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RB1P06400 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RB1P06400 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RB1P06400 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RB1P06400 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RB1P06400 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RB1P06400 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms